Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., cytochrome c oxidase accessory protein FixG from Pseudomonas stutzeri RCH2

 Score =  481 bits (1239), Expect = e-140
 Identities = 234/469 (49%), Positives = 308/469 (65%), Gaps = 7/469 (1%)

Query: 4   DKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVP 63
           ++I V+DVTP      +  G   D +    +IY R   G ++ LRR GG  L +LF    
Sbjct: 3   EQIPVRDVTPP-----SKAGASADLYAAREKIYTRAFSGLFRNLRRVGGAVLFILFFGTV 57

Query: 64  WISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYL 123
           W+++  RQA+  D+  ++F+ FG T +PQD  LL+ L +I AFGLFFIT F GRVWCGY 
Sbjct: 58  WLNWNGRQAVWWDLPERKFHIFGATFWPQDFMLLSWLLIICAFGLFFITVFAGRVWCGYT 117

Query: 124 CPQTVWTFMYIWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVG 183
           CPQ+V+T++++W E+  EG+ N+R K D +PM+A   ARK  KH  WLA+ ++   TFVG
Sbjct: 118 CPQSVFTWVFMWAEKITEGDRNQRMKLDKAPMSANKFARKLAKHAIWLAVGILVAITFVG 177

Query: 184 YFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDK 243
           YF PIR LV D  TL+   W  FW+ FF L TYG+AG++R  +CI+MCPYARFQS MFDK
Sbjct: 178 YFTPIRELVPDLLTLNVNGWAAFWIGFFTLATYGSAGFLREQVCIYMCPYARFQSVMFDK 237

Query: 244 DTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCG 303
           DT IV YD  RGE+RGPR + AD KA+GLGDCIDC +CVQVCPTGIDIRDGLQ ECI C 
Sbjct: 238 DTLIVSYDPRRGEKRGPRKKDADYKAMGLGDCIDCTMCVQVCPTGIDIRDGLQIECIGCA 297

Query: 304 ACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAA 363
           ACIDACD  M++M Y +GLISYTTEH LSG+ T ++RP+L+GY    L M+ LF   V  
Sbjct: 298 ACIDACDAIMDKMNYPRGLISYTTEHNLSGQKTHLLRPRLIGYAVALLAMMSLFSYAVYD 357

Query: 364 VDPAGLTVLRDRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSV 423
                L VL+DR  L+R N  G IEN Y LK++NK Q+ QT+ +   GLD + + G+  V
Sbjct: 358 RPLVKLDVLKDRV-LYRENELGNIENVYTLKIMNKAQREQTFVIEASGLDGLVYEGRSEV 416

Query: 424 VVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHD-ESHQFTLEVESRFI 471
             + GE++ +P+ L   PE L S+   I F +   +      + +SRFI
Sbjct: 417 RAEAGELVTIPVELSIAPEKLPSSTNEIVFSIRSIDDASINDDADSRFI 465