Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., 4Fe-4S ferredoxin, iron-sulfur binding (RefSeq) from Shewanella amazonensis SB2B

 Score =  452 bits (1163), Expect = e-131
 Identities = 227/440 (51%), Positives = 291/440 (66%), Gaps = 12/440 (2%)

Query: 13  PKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVPWISYGDRQA 72
           PK  + KT    GG       +I  R   G +Q+ R   G  L+ LF L+P+IS+  RQA
Sbjct: 55  PKKPSSKTESKSGG-------KIQFRSQPGLFQRWRSATGTGLIALFFLLPFISWHGRQA 107

Query: 73  ILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFM 132
           I  D+ NQQF FFGT+L+PQD TLLA +F+ AAFGLFF+T F GRVWCG+LCPQT WTFM
Sbjct: 108 IWFDLSNQQFYFFGTSLWPQDFTLLAWVFIAAAFGLFFVTLFWGRVWCGFLCPQTQWTFM 167

Query: 133 YIWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALV 192
           + W EEK EG+ N+R K D +P + E ++++  KH +WL ++L+TG  F+ YFVP R L 
Sbjct: 168 FAWVEEKFEGSRNQRIKLDKAPWSREKLSKRLGKHSSWLLMSLLTGCGFIAYFVPARELY 227

Query: 193 IDFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDV 252
              F+ S  FW   WV FFA+CTY NAGWMR  MC+H CPYARFQSAMFD+ T  V YD 
Sbjct: 228 PAIFSFSGGFWDTAWVWFFAICTYLNAGWMREQMCLHCCPYARFQSAMFDEFTKTVTYDA 287

Query: 253 ARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACDNT 312
           ARGE RGPR RKA   A  LGDC+DC+LCV+VCPTGIDIR+GLQYECINCGAC+DAC+ T
Sbjct: 288 ARGESRGPRKRKA---ATDLGDCVDCNLCVEVCPTGIDIRNGLQYECINCGACVDACNQT 344

Query: 313 MERMGYAKGLISYTTEHRLSGKHTKV-MRPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTV 371
           M   GY   LI++T+E  L G    +  R + +GYG   + ++      +A+     L V
Sbjct: 345 MANFGYKPDLIAFTSELGLKGATPPLWQRKRFIGYGLALVAILATMGLDMASRSSIELNV 404

Query: 372 LRDRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVL 431
           LRDR  L+R  + G+IENTY LK+ NKTQQP+ YQLSV G   ++   K  V + PGE +
Sbjct: 405 LRDRQSLYRETTGGQIENTYLLKIRNKTQQPKEYQLSVTGALTLA-MSKTEVSIAPGEQV 463

Query: 432 NLPMTLGAKPENLSSAVTTI 451
            LP+TL A   ++  + T +
Sbjct: 464 ELPLTLTAMSADIQRSRTKL 483