Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  602 bits (1551), Expect = e-176
 Identities = 285/459 (62%), Positives = 344/459 (74%), Gaps = 5/459 (1%)

Query: 14  KVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVPWISYGDRQAI 73
           K+  P   K    DRFNP NRIYVR   G +  LRR  GW  +L F ++PWI +GDRQA+
Sbjct: 17  KIHQPDADKA---DRFNPRNRIYVRAIDGLWSSLRRRMGWVAMLFFLILPWIPWGDRQAV 73

Query: 74  LLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMY 133
             ++G Q+F+ FG T++PQDLTLLA LFMIAAF LFF+TT+LGRVWCGY CPQTVWTFM+
Sbjct: 74  WFNLGEQKFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWCGYTCPQTVWTFMF 133

Query: 134 IWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVGYFVPIRALVI 193
           IWFEEKLEG  NKR K D  P + + + RKT KH AW+ ++L+T  TFV YFVP R + +
Sbjct: 134 IWFEEKLEGARNKRIKLDQMPWSFDKIWRKTAKHTAWIVLSLLTAMTFVSYFVPNREVYV 193

Query: 194 DFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDKDTFIVGYDVA 253
           D FTL+A+    FWV+FF L TYGNAGWMR IMCIHMCPYARFQSAMFDK+TFIVGYD  
Sbjct: 194 DVFTLNASGGIYFWVVFFTLATYGNAGWMREIMCIHMCPYARFQSAMFDKNTFIVGYDAK 253

Query: 254 RGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCGACIDACDNTM 313
           RGE RGPRSRKADPK +GLGDCIDCDLCVQVCPTGIDIR+GLQYECINCGACIDACD TM
Sbjct: 254 RGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECINCGACIDACDQTM 313

Query: 314 ERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAAVDPAGLTVLR 373
           ERMGY  GLISYTTE++L G   KV+RPKL+GYG V  VMI +F    A + P  + ++R
Sbjct: 314 ERMGYPLGLISYTTENKLEGVKEKVLRPKLVGYGVVLAVMILIFIYASATIAPVRMDIIR 373

Query: 374 DRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSVVVQPGEVLNL 433
           DR QL+R N+ G IENT+ LK++NKT+Q   Y +SV+GL+   WYG  SV +  GEVL L
Sbjct: 374 DRNQLYRENNQGLIENTFTLKILNKTEQAHEYTMSVEGLNNYKWYGPTSVTIAGGEVLTL 433

Query: 434 PMTLGAKPENLSSAVTTIQFIL--HDESHQFTLEVESRF 470
           P+++G  P  LSS+VT I+  +  H +  +  +E ESRF
Sbjct: 434 PVSVGVDPVELSSSVTNIEIKVKTHIDGEEVEVEQESRF 472