Pairwise Alignments

Query, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

 Score =  314 bits (805), Expect = 4e-90
 Identities = 207/506 (40%), Positives = 284/506 (56%), Gaps = 22/506 (4%)

Query: 1   MGLAIIHSRASIGVQAPPVTVEVHISNGMPGFTLVGLPETTVKESRDRVRSAIINSRFEF 60
           M L    S A  G+    V +E  I++G+PG  LVGLP+  ++ESRDRVR+A+ N    +
Sbjct: 1   MALGRAFSVAVRGLDGEIVEIEADITSGLPGVHLVGLPDAALQESRDRVRAAVTNCGNSW 60

Query: 61  PAKRITVNLAPADLPKEGGRFDLPIALGILAASDQIARNKLESYEFIGELALSGEIRGVK 120
           P  R+T+ L+PA LPK G  +D+ +A  +L+A  +    +LE+   +GEL+L G +R V+
Sbjct: 61  PMARLTLALSPATLPKMGSVYDIALAAAVLSAQQKKPWERLENTLLLGELSLDGRVRPVR 120

Query: 121 GVLPAALAANQVE-RCLVVPHSNGDQAALV------GVERHKSAQSLLEVCADLCGQQTL 173
           GVLPA LAA +     +VVP  N  +A+LV      GV      QS L     L G+ T 
Sbjct: 121 GVLPAVLAAKRDGWPAVVVPADNLPEASLVDGIDVRGVRTLGQLQSWLRGSTGLAGRITT 180

Query: 174 SLFQSSPSVQQVSQTRDLQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCD 233
           +   ++P         DL D++GQ Q + A+E+AAAG H+L+  GPPG GKTMLA RL  
Sbjct: 181 A--DTTP-----ESAADLADVVGQSQARFAVEVAAAGAHHLMLTGPPGVGKTMLAQRLPG 233

Query: 234 LLPEMSDEEAMETASIASLTQQEINQHNWKLR-PFRAPHHSSSMAALVGGGT-IPRPGEI 291
           LLP +S  E++E  +I S+            R PF APHHSSS+AALVGGG+ + RPG +
Sbjct: 234 LLPSLSGSESLEVTAIHSVAGLLSGDTPLITRPPFVAPHHSSSVAALVGGGSGMARPGAV 293

Query: 292 SLAHNGLLFLDEMPEFERKVLDSLREPLESGEIVISRAQGKTRFPARFQLVGALNPSPTG 351
           S AH G+LFLDE  E     L++LR PLE GEI ++R  G   +PARFQLV A NP P  
Sbjct: 294 SRAHRGVLFLDECAEISLSALEALRTPLEDGEIRLARRDGVACYPARFQLVLAANPCPCA 353

Query: 352 YYEGSQARANPQSILRYLSRLSGPLLDRFDMSIEIPALPKGTLANGGDRGESTAAVRQRV 411
             +         +  RYL +LSGPLLDR D+ +++  L  G  +     GEST+ VRQRV
Sbjct: 354 PADPQDCICAAATKRRYLGKLSGPLLDRVDLRVQMHRLRAGAFSAAD--GESTSQVRQRV 411

Query: 412 WVARE----RMLARSGKVNALLQSREIEQYCPLLKADAEFLESALHRLGLSIRAYHRIIK 467
            +ARE    R      + NA +    + +      A    L +AL R  LSIR   R ++
Sbjct: 412 ALAREAAAQRWRPHGFRTNAEVSGPLLRRKFRPSSAAMLPLRTALDRGLLSIRGVDRTLR 471

Query: 468 VARTIADLQGEAQIARPHLAEALGYR 493
           VA ++ADL G        +A AL +R
Sbjct: 472 VAWSLADLAGRTSPGIDEVAAALSFR 497