Pairwise Alignments

Query, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., competence protein comM, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  350 bits (897), Expect = e-100
 Identities = 220/551 (39%), Positives = 296/551 (53%), Gaps = 57/551 (10%)

Query: 3   LAIIHSRASIGVQAPPVTVEVHISN-GMPGFTLVGLPETTVKESRDRVRSAIINSRFEFP 61
           +A +   A  GV A  V +EV  +  GMP FTLVGL E  V+E+R+RV +A+       P
Sbjct: 2   IARVACAALQGVDATRVDLEVDFARQGMPAFTLVGLAEGAVREARERVMAALRAVGLRLP 61

Query: 62  AKRITVNLAPADLPKEGGRFDLPIALGILAASDQIARNKLESYEFIGELALSGEIRGVKG 121
             RITVNLAPAD  K G  +DLP+A+ +L A+  I       + F GEL+L+GE++ V G
Sbjct: 62  PARITVNLAPADRRKGGSGYDLPLAVALLEAAGIIPEGSTRGWFFAGELSLAGELKPVPG 121

Query: 122 VLPAALAANQ-----------------VERC----------------------------- 135
           +LP A+ A                   V  C                             
Sbjct: 122 ILPVAILARDEAARAAAGQPPKAHPEGVSSCARQTDAQPAGVRPADTRSATAGHDGTIRG 181

Query: 136 LVVPHSNGDQAALVGVERHKSAQSLLEVCADLCGQQTLSLFQSSPSVQQVSQTR--DLQD 193
           ++VP  N  +AA+V       A +L EV A L G+  L         Q        D  +
Sbjct: 182 IIVPKVNAAEAAVVDGIAAYGASTLGEVVAFLAGEGDLVRAVPPGMAQGAGGVHLYDFAE 241

Query: 194 IIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLLPEMSDEEAMETASIASLT 253
           + GQ+  KRA+EIAAAG HNLLF+GPPG+GKTMLA R+  +LP ++  +A+E   + S+ 
Sbjct: 242 VKGQEHAKRAIEIAAAGAHNLLFIGPPGSGKTMLAQRIPSVLPPLTPADALEVTKVYSVA 301

Query: 254 QQ-EINQHNWKLRPFRAPHHSSSMAALVGGGTIPRPGEISLAHNGLLFLDEMPEFERKVL 312
              +  Q     RPFRAPHH+ S   L GGG  PRPGE+SLAH G+LFLDE+PEF +  L
Sbjct: 302 GLLDAGQGLVSQRPFRAPHHTVSEVGLAGGGAYPRPGEVSLAHRGVLFLDELPEFRKTAL 361

Query: 313 DSLREPLESGEIVISRAQGKTRFPARFQLVGALNPSPTGYYEGS--QARANPQSILRYLS 370
           + LR+PLE G + ISRA     +PA   LV A+NP P GY   +      +   + RY +
Sbjct: 362 EVLRQPLEDGVVTISRAMQTLTYPADCMLVAAMNPCPCGYATDATHACTCSTMQVQRYRA 421

Query: 371 RLSGPLLDRFDMSIEIPALPKGTLANGGDRGESTAAVRQRVWVARERMLARSG----KVN 426
           RLSGPLLDR D+ +E+PA+P   L      G S+A +R+R+  AR    AR      + N
Sbjct: 422 RLSGPLLDRIDLHVEVPAVPWEDL-RSVKGGTSSAEMRERIMAARAVQTARFAGTHCRTN 480

Query: 427 ALLQSREIEQYCPLLKADAEFLESALHRLGLSIRAYHRIIKVARTIADLQGEAQIARPHL 486
           A L    +E++C L   +  FL  A+H L LS RAY RI+++ARTIADL G   +   HL
Sbjct: 481 ADLGGALLEEHCRLGTPEHTFLGKAVHSLALSARAYTRILRIARTIADLDGSEPLQVRHL 540

Query: 487 AEALGYRAMDR 497
           AEA+  R +DR
Sbjct: 541 AEAINCRVLDR 551