Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., Probable transmembrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (499), Expect = 2e-55
 Identities = 103/182 (56%), Positives = 133/182 (73%), Gaps = 3/182 (1%)

Query: 4   LAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYL 63
           L +    VALAEIGDKTQLL+L+LA+R+RKP PIIA I  ATLANHA A  +G  V+ + 
Sbjct: 5   LLVPTAIVALAEIGDKTQLLALILAARFRKPWPIIAGIIAATLANHAAAGAVGAWVSGFF 64

Query: 64  SPDILKWVLVVSFLAMAGWILIPDKLDGEESISTR--GPFVASFIAFFMAEIGDKTQIAT 121
           S  +L W+L  SF A A W L+PDKLD EE+ + R  GPF+ + IAFF+AEIGDKTQIAT
Sbjct: 65  SDAVLHWILAASFTATALWTLVPDKLDDEEANTARKFGPFLTTLIAFFLAEIGDKTQIAT 124

Query: 122 SILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMALAT 181
            +L AQY + L  VI+GTT+GML+ANVPVVL G  +A+K+PL LIR++ A  F ++A+  
Sbjct: 125 VMLAAQYPE-LWLVIIGTTVGMLIANVPVVLAGNFAAEKLPLALIRRLAASAFFVLAIVA 183

Query: 182 AF 183
            +
Sbjct: 184 VY 185