Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., Probable transmembrane protein from Acidovorax sp. GW101-3H11

 Score =  180 bits (456), Expect = 2e-50
 Identities = 96/185 (51%), Positives = 130/185 (70%), Gaps = 3/185 (1%)

Query: 1   MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVA 60
           M    IS   VALAE+GDKTQLL+L+LA+R+RKP PI+  I +ATL NH LA  +G  V 
Sbjct: 1   MEPFFISTAIVALAEMGDKTQLLALVLAARFRKPWPIVLGILVATLVNHGLAGAVGAWVT 60

Query: 61  DYLSPDILKWVLVVSFLAMAGWILIPDKLD-GEESISTR-GPFVASFIAFFMAEIGDKTQ 118
            ++ P +L+W+L  SF+AMA W+LIPDKLD GE   S R G F  + +AFF+AE+GDKTQ
Sbjct: 61  TFVVPQVLRWILGASFIAMAVWMLIPDKLDEGEADGSPRWGVFGTTVVAFFLAEMGDKTQ 120

Query: 119 IATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMA 178
           IAT +L AQY +A  WV+ GTTLGM++AN PVV +G+    ++P+  +  V+A +FL++ 
Sbjct: 121 IATVMLAAQY-NAYLWVVAGTTLGMMIANAPVVWLGERITRRVPIRAVHVVSAVIFLVLG 179

Query: 179 LATAF 183
           L   F
Sbjct: 180 LLAIF 184