Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 27/191 (14%)

Query: 11  VALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYLSPDILKW 70
           +++AE+GDKT L++ LLA R+R+   ++  + LA      L+  +G +    L    ++W
Sbjct: 24  ISIAELGDKTFLIAALLAMRHRRRWVLLGTV-LALALMTILSVAIGQLANQLLPETWVRW 82

Query: 71  VLVVSFLAMAGWILIPDKL------------DGEE-----------SISTRGPFVASFIA 107
              V+F A+ G  L  D L            + EE            ++     + +F  
Sbjct: 83  A-EVAFFAIFGLKLWRDSLGMPQVGDSAEEEEAEELVLGAEAKLGKQVTVFTVVLEAFSL 141

Query: 108 FFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIR 167
            F+AE GD+TQ  T  L A  A     V +G  LG  +  V  V +G+  +  +   ++ 
Sbjct: 142 VFVAEWGDRTQFTTMALAA--AGNAWGVALGAILGHAIVAVIAVNVGRWVSRHISERVLT 199

Query: 168 KVTAGLFLLMA 178
           +++AGLFLL A
Sbjct: 200 QISAGLFLLFA 210



 Score = 42.4 bits (98), Expect = 6e-09
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 101 FVASFIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADK 160
           F +  I   +AE+GDKT +  ++L  ++     WV++GT L + L  +  V IG+L+   
Sbjct: 17  FTSGLIFISIAELGDKTFLIAALLAMRHRRR--WVLLGTVLALALMTILSVAIGQLANQL 74

Query: 161 MPLGLIRKVTAGLFLLMAL 179
           +P   +R      F +  L
Sbjct: 75  LPETWVRWAEVAFFAIFGL 93