Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 108 a.a., membrane protein-like from Synechococcus elongatus PCC 7942

 Score = 47.0 bits (110), Expect = 1e-10
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 8/87 (9%)

Query: 3  VLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVV---- 58
          +L  S   V L+E+GDK+Q+ ++ L    R P     A+F  T +   LA+ +GVV    
Sbjct: 5  LLGASFLAVFLSELGDKSQVAAVALGGSSRSP----RAVFFGTASALVLASLIGVVLGDQ 60

Query: 59 VADYLSPDILKWVLVVSFLAMAGWILI 85
          +ADY+ P  LK   +V F+ +   +L+
Sbjct: 61 IADYIPPQWLKLAAIVGFVVIGLRLLL 87



 Score = 43.1 bits (100), Expect = 2e-09
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)

Query: 103 ASFIAFFMAEIGDKTQIATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMP 162
           ASF+A F++E+GDK+Q+A   LG       + V  GT   ++LA++  V++G   AD +P
Sbjct: 8   ASFLAVFLSELGDKSQVAAVALGGSSRSPRA-VFFGTASALVLASLIGVVLGDQIADYIP 66

Query: 163 ------LGLIRKVTAGLFLLM 177
                   ++  V  GL LL+
Sbjct: 67  PQWLKLAAIVGFVVIGLRLLL 87