Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Probable conserved transmembrane protein from Mycobacterium tuberculosis H37Rv

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 7/187 (3%)

Query: 1   MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVA 60
           ++   +S+  V LAE+GD++QL+++    RYR  + ++  + +A    H +A  +G  + 
Sbjct: 2   LAATLLSLGAVFLAELGDRSQLITMTYTLRYRWWV-VLTGVAIAAFTVHGVAVAIGHFLG 60

Query: 61  DYLSPDILKWVLVVSFLAMAGWILIPDKL-DGEESISTRGPFVASFI---AFFMAEIGDK 116
             +       V  ++FL  A W+   D   D E S +   P +A F    +F +AE+GDK
Sbjct: 61  STVPARPAACVSAIAFLIFAVWVWREDTASDSETSPTAAEPRLALFTVVSSFALAELGDK 120

Query: 117 TQIATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLL 176
           T +AT  L + +  A  W+  GTTLGM+LA+   +  G L   ++P  L++ +T  LFLL
Sbjct: 121 TTLATVTLASDHHWAGVWI--GTTLGMILADGLAIGAGLLLHRRLPERLLQVLTGLLFLL 178

Query: 177 MALATAF 183
             L   F
Sbjct: 179 FGLWLLF 185