Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  193 bits (491), Expect = 1e-54
 Identities = 101/185 (54%), Positives = 136/185 (73%), Gaps = 2/185 (1%)

Query: 1   MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVA 60
           +  L  S  TVA+AEIGDKTQLL+LLLA+R++    II  IFL+TL NH  AAWLG    
Sbjct: 14  LEALLASTFTVAIAEIGDKTQLLALLLAARFKNKTAIILGIFLSTLFNHFAAAWLGQWAI 73

Query: 61  DYLSPDILKWVLVVSFLAMAGWILIPDKLDGEES-ISTRGPFVASFIAFFMAEIGDKTQI 119
           ++++PD+ ++++  SF A+A W+LIPDK+D EES     GPFVA+FI FF+AE+GDKTQI
Sbjct: 74  NWVNPDVARYLVAASFFAIALWVLIPDKVDAEESRFYKMGPFVATFILFFIAEMGDKTQI 133

Query: 120 ATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMAL 179
           AT +L A+Y DAL+ V+ GTT+GMLLANVPVV+ G  SA+K+P+  I +  A LF L+ +
Sbjct: 134 ATVVLSAKY-DALAMVVAGTTIGMLLANVPVVIAGHFSAEKLPMKWIHRGCAILFALLGV 192

Query: 180 ATAFF 184
           AT  +
Sbjct: 193 ATLIY 197