Pairwise Alignments

Query, 688 a.a., glycine--tRNA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., glycyl-tRNA synthetase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  895 bits (2313), Expect = 0.0
 Identities = 452/686 (65%), Positives = 545/686 (79%), Gaps = 2/686 (0%)

Query: 3   KEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAE 62
           +  LIELGTEELPPK LR LAE+F ANF  EL  AD+A +   W+A PRRLAL +  LA 
Sbjct: 4   ENLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLALNITELAI 63

Query: 63  SQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTDKGEWLLFKEQVQ 122
           +Q D++VEKRGPAV+ AFDA GKPTKAAEGWARGNGITV+QAERLVTDKGEWL++  +V+
Sbjct: 64  AQADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVE 123

Query: 123 GQQTASVVVEMAAKALANLPIAKPMRWGDKETQFIRPVKTLTILFGSELIQGEILGVASA 182
           G +T S+V  MA +AL  LPI KPMRWG  +TQFIRPV T T+L GSELI+GE+LG+ SA
Sbjct: 124 GVETKSLVAAMAQRALDKLPIPKPMRWGSSKTQFIRPVHTATMLLGSELIEGELLGIKSA 183

Query: 183 RTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQAAQQLGGIADL 242
           R +RGHRFMG   F ++ A+ Y  +L+E+GKVIADY +RKA+I   +++AA ++GG AD+
Sbjct: 184 RNIRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEKAAAKIGGTADI 242

Query: 243 EDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVYDASKKLLPNFIF 302
           EDAL+EEVTSLVEWPVV+TA FEEKFL VP+EALVYTMKGDQKYFPV+D + KLLPNFIF
Sbjct: 243 EDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFDDAGKLLPNFIF 302

Query: 303 VSNIESKEPRHIVEGNEKVVRPRLADAEFFFNTDRKRPLVDRLPLLENAIFQQQLGTIKD 362
           V+NIESK+P  I+ GNEKVVRPRLADAEFFFNTD+K  L  RLP LE  +FQQQLGT+KD
Sbjct: 303 VANIESKDPAQIISGNEKVVRPRLADAEFFFNTDKKHTLESRLPSLETVLFQQQLGTLKD 362

Query: 363 KTDRITELAGYIAEQIGADVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEA 422
           K  RI+ LA +IAEQ GA+   + RAGLL+K DLMT+MV EFTDTQG MGMHYAR DGE 
Sbjct: 363 KVTRISALAAFIAEQTGANAVDAARAGLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGET 422

Query: 423 EEVAVALNEQYMPRFAGDELPSRGVSAAVAMADKLDTIVGIFGIGQAPKG-SDPFALRRA 481
           E VA+A+ EQY P+F+GD +P+  VS AVA+ADKLDT+VGIFGIGQAPKG +DPFALRRA
Sbjct: 423 EAVALAMEEQYKPKFSGDTVPTAAVSCAVALADKLDTLVGIFGIGQAPKGAADPFALRRA 482

Query: 482 SLGVLRILVEYGYQLDLVDLIAKAKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSI 541
           ++GVLRI+VE    LDLV LIAKA+ L G  L+NAN  +EV+EF++ RF  WYQD G ++
Sbjct: 483 AIGVLRIIVENKLPLDLVTLIAKAQELHGANLSNANASEEVLEFLMARFRAWYQDKGINV 542

Query: 542 DIIQAVLARNPTKPADFDQRVKAVSHFRALEEAEALAAANKRVGNILAKYDGELGEEIDL 601
           D+I AVLAR PT+PADFD R+ AVSHFR LE + ALAAANKRV NILAK +GEL   +++
Sbjct: 543 DVILAVLARRPTRPADFDSRINAVSHFRGLEASSALAAANKRVSNILAKVEGELPSSVNV 602

Query: 602 ALLQEDAEKALAEAVEIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEA 661
           ALL E AE+ALA  +  +   L P FA  +YQ+AL+ LA LR  VD FF++VMVMADD A
Sbjct: 603 ALLSEAAEQALAAKLAELQPQLAPLFANADYQQALTLLASLRESVDQFFEDVMVMADDAA 662

Query: 662 LKKNRLTLLNKLRNLFLQIADISLLQ 687
           L+ NRL LLN LR  FL +ADISLLQ
Sbjct: 663 LRNNRLALLNNLREQFLHVADISLLQ 688