Pairwise Alignments

Query, 688 a.a., glycine--tRNA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., glycyl-tRNA synthetase subunit beta from Herbaspirillum seropedicae SmR1

 Score =  505 bits (1300), Expect = e-147
 Identities = 300/709 (42%), Positives = 422/709 (59%), Gaps = 28/709 (3%)

Query: 1   MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADI--AHEGVTWFATPRRLALKVA 58
           M +  L+EL TEELPPK L  L +AFA      L +     A    T +ATPRRLA+ + 
Sbjct: 1   MNQTLLVELVTEELPPKALAKLGDAFATGIFNGLQSRGYLDADATATAYATPRRLAVSIT 60

Query: 59  NLAESQPDRVVEKRGPAVNVAFDADGKPT----KAAEGWARGNGITV---EQAERLVTDK 111
            +  + PD+ + ++   V+VA DA+G+P+    K     A   G TV   +Q ER    K
Sbjct: 61  QVCAASPDKSIREKVLPVSVALDAEGRPSAPLVKKLAALAASTGATVITPDQLERAQDGK 120

Query: 112 GEWLLFKEQVQGQQTASVVVEMAAKALANLPIAKPM-------RWGDKETQFIRPVKTLT 164
            E   +    +G   A  +     ++L+ LPI K M       R   +   F+RP   L 
Sbjct: 121 AESFFYTYTAKGSALAVGLQAALDESLSKLPIPKVMSYQRQFGRAAGETVHFVRPAHYLV 180

Query: 165 ILFGSELIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAM 224
            L G++++    LG+ + RT  GHRF+      I + + Y   L ++G VIA +  R+  
Sbjct: 181 ALLGNDVVPINTLGLDAGRTTLGHRFLSAGALQIAAPDAYVESLAQQGNVIASFTERREK 240

Query: 225 IIEGSQQAAQQLGGIAD---LEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMK 281
           I     +AA      AD   + +AL++EVT+LVEWPVV   KFE++FL VP E L+ TM+
Sbjct: 241 I-----RAALLAKAGADQVLMPEALLDEVTALVEWPVVYECKFEDEFLAVPQECLILTMQ 295

Query: 282 GDQKYFPVYDASKKLLPNFIFVSNIESKEPRHIVEGNEKVVRPRLADAEFFFNTDRKRPL 341
            +QKYF + DA+ +L   F+ VSN+E+  P HI+ GNE+VVRPRL+DA+FFF  D+K+ L
Sbjct: 296 TNQKYFALTDANGRLRSRFLIVSNLETAHPEHIIGGNERVVRPRLSDAKFFFEQDKKKTL 355

Query: 342 VDRLPLLENAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKRAGLLAKCDLMTSMV 401
            +R+P L N ++  +LG    +T+R+  LAG IA  +G DV+ ++R  LLAK DL+T MV
Sbjct: 356 AERVPQLANVVYHNKLGNQLQRTERVQALAGKIASLLGGDVKLAERGALLAKADLLTDMV 415

Query: 402 FEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGVSAAVAMADKLDTIV 461
            EF + QG+MG +YARHDGEA+EVA+A +E Y PRFAGD LP+     AVA+ADKL+T+V
Sbjct: 416 GEFPELQGIMGTYYARHDGEADEVALAASEHYQPRFAGDALPTTATGTAVALADKLETLV 475

Query: 462 GIFGIGQAPKG-SDPFALRRASLGVLRILVEYGYQLDLVDLIAKAKSLFGDRLTNANVEQ 520
           GI+GIG  P G  DPFALRR +LGVLR+LVE    L L  L+  A  LF       +   
Sbjct: 476 GIWGIGLQPTGDKDPFALRRHALGVLRMLVEKRLPLSLTALLDAATGLFAGNANFKDPRA 535

Query: 521 EVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVSHFRALEEAEALAAA 580
           +V  F+  R     ++ GF+ + ++AV+A+ P    +  +R++AV  F AL EAEALAAA
Sbjct: 536 DVQAFIYDRLRGLLRERGFAQNEVEAVVAQQPEVLDNVVERLQAVQAFAALPEAEALAAA 595

Query: 581 NKRVGNILAKYDG---ELGEEIDLALLQEDAEKALAEAVEIMAEALEPAFATGNYQEALS 637
           NKR+ NIL K +G   +    +  +LLQE AE+ L  A++     +E A+A G++  AL 
Sbjct: 596 NKRITNILKKIEGVAIDAHGAVQESLLQEAAEQGLFAAMQTTRPQVEAAYAKGDFAGALK 655

Query: 638 KLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADISLL 686
            LA LR  VDAFF++VMV A+DE L+KNR  LL  L  +  Q+ADIS L
Sbjct: 656 ALAQLRQNVDAFFNDVMVNAEDEQLRKNRQALLAALHGMLNQVADISKL 704