Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 792 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 545/793 (68%), Positives = 654/793 (82%), Gaps = 2/793 (0%)

Query: 12  VLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVTIHEDNSVSV 71
           VLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C DI + IH D S++V
Sbjct: 1   VLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITV 60

Query: 72  SDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVL 131
            D+GRGIP ++H EE VSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSE+++
Sbjct: 61  RDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEELV 120

Query: 132 LTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTNIEFHYDILAKRLR 191
           LT+ R GKI  QTY HGVPQAP+A+VG++E TGT + F  S++TF NI F +DILAKR+R
Sbjct: 121 LTVRRSGKIWEQTYIHGVPQAPMAIVGDSETTGTQIHFKASSETFKNIHFSWDILAKRIR 180

Query: 192 ELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKVFHFNQEREDGI 251
           ELSFLNSGV I L DER   K++ F YEGG++AFV +LN NKTP+++ VFHFN +REDGI
Sbjct: 181 ELSFLNSGVGIVLKDERS-GKEELFKYEGGLRAFVEYLNTNKTPVNQ-VFHFNVQREDGI 238

Query: 252 SVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDKEGFSKKAQAAT 311
            VE+A+QWND F EN+ CFTNNIPQRDGGTHL GFR ALTR LNNY+++EG +KK + AT
Sbjct: 239 GVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQEGLAKKHKVAT 298

Query: 312 SGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLADFLAENPSEAKN 371
           +GDDAREGLTA++SVKVPDPKFSSQTKDKLVSSEVK+AVE  M +  +DFL ENP+EAK 
Sbjct: 299 TGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKL 358

Query: 372 VCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSELYIVEGDSAGG 431
           V  K+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPALSELY+VEGDSAGG
Sbjct: 359 VVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELYLVEGDSAGG 418

Query: 432 SAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRY 491
           SAKQGRNR+ QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCGIGR+EYN DKLRY
Sbjct: 419 SAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRY 478

Query: 492 HNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEE 551
           HNIIIMTDADVDGSHIRTLLLTFF+RQ+PELIERGYIYIAQPPLYKVKKGKQEQYIKD++
Sbjct: 479 HNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDD 538

Query: 552 AMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMSRRYPYAMLHELI 611
           AM +Y    A++ A LH+N DAP ++GE LE+LV  +   +K ++R+SR YP  +    I
Sbjct: 539 AMEEYMTQSALEDASLHLNEDAPGISGEALERLVNDFRLVMKTLKRLSRLYPQELTEHFI 598

Query: 612 YVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAELNVYLPKIQVRTHG 671
           Y+P ++ E  +D AA++ W  +   +L   E     Y   +  + E NV+LP++++ +HG
Sbjct: 599 YLPAVSLEQLSDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWLPEVELISHG 658

Query: 672 VTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISSFAAALDWLIKES 731
           +++    + D   S +Y  +  L   L  L++ GA+I+RGER + ++ F  AL+WL+ ES
Sbjct: 659 LSNYVTFNRDFFGSNDYKTVVSLGAQLSTLLDEGAYIQRGERKKSVTEFKEALEWLMAES 718

Query: 732 RRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTTLMGDQVEPRRA 791
            +  +IQRYKGLGEMNPDQLWETTMDP +RRM++VTIEDA+GAD++F TLMGD VEPRR 
Sbjct: 719 TKRHTIQRYKGLGEMNPDQLWETTMDPGSRRMLKVTIEDAIGADQIFNTLMGDAVEPRRD 778

Query: 792 FIETNALKVANLD 804
           FIE+NAL V+NLD
Sbjct: 779 FIESNALAVSNLD 791