Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 823 a.a., DNA gyrase subunit B from Paraburkholderia graminis OAS925

 Score =  941 bits (2431), Expect = 0.0
 Identities = 481/821 (58%), Positives = 609/821 (74%), Gaps = 26/821 (3%)

Query: 3   NNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVT 62
           N+Y +SSI++L+GL+AVRKRPGMYIGDT DGTGLHH+VFEV+DNSIDEALAGYC DI V 
Sbjct: 11  NSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGYCNDIQVI 70

Query: 63  IHEDNSVSVSDDGRGIPTEMHPEEKV----SAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 118
           IH DNS+S++D+GRG+PT +  ++K     SAAE++MT LHAGGKFD NSYKVSGGLHGV
Sbjct: 71  IHADNSISITDNGRGVPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGV 130

Query: 119 GVSVVNALSEKVLLTIYRGGKIHSQTYHHGVPQ------------APLAVVGETERTGTT 166
           GVS VNALS  + LTI R GK H   +H GVPQ            +P+ VVG+TE  GT 
Sbjct: 131 GVSCVNALSAWLRLTIRRDGKKHFMEFHRGVPQNRVIEEIDGVAVSPIQVVGDTENRGTE 190

Query: 167 VRFWPSAQTFTNIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFV 226
           V F      F N+E+HYDILAKR+RELSFLN+GV I+LTD+R   K+D F + GG++ FV
Sbjct: 191 VHFMADETIFGNVEYHYDILAKRIRELSFLNNGVRIRLTDQRT-GKEDDFAFVGGVKGFV 249

Query: 227 THLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGF 286
            ++N+ K+ +H  +FH + E+ DG+ VEVAMQWND + EN+ CFTNNIPQRDGGTHL G 
Sbjct: 250 EYINKTKSVLHPTIFHVSGEK-DGVGVEVAMQWNDSYNENVLCFTNNIPQRDGGTHLTGL 308

Query: 287 RGALTRTLNNYMDKEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEV 346
           R A+TR LN Y+     +KKA+  TSGDD REGL+ V+SVKVP+PKFS+QTKDKLVSSEV
Sbjct: 309 RAAMTRVLNKYIADHEVAKKAKVETSGDDMREGLSCVLSVKVPEPKFSAQTKDKLVSSEV 368

Query: 347 KSAVESAMNEKLADFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPG 406
           ++ VE  + + L +FL E P++AK +C KI+DAARAR+AARKAREMTRRKG LD  GLPG
Sbjct: 369 RAPVEDVVAKALEEFLLETPNDAKIICGKIVDAARARDAARKAREMTRRKGVLDGVGLPG 428

Query: 407 KLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQ 466
           KLADCQEKDPA SE+YIVEGDSAGGSAKQGR+RK QAILPL+GK+LNVEKAR+DK+LSS+
Sbjct: 429 KLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARYDKLLSSE 488

Query: 467 EVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERG 526
           ++ TLITALGCGIG+++YN DKLRYH IIIMTDADVDG+HIRTLLLTFFYRQMPE+IERG
Sbjct: 489 QIVTLITALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPEMIERG 548

Query: 527 YIYIAQPPLYKVKKGKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQ 586
           YIYIAQPPL+K+K GK E+Y+KDE  +N + + LA+ G+EL  + +A  + G+ L +L +
Sbjct: 549 YIYIAQPPLFKIKAGKDERYLKDESEVNAHILKLALQGSELLASENATPITGDALGELAR 608

Query: 587 QYNAAIKLVERMSRRYPYAMLHELI--YVPRINAELCADKAAVEAWTQRLVEQLNAKEVG 644
            Y  A  +V R+SR Y    L  ++   V  +++E  A+ +A +A   +L +     EV 
Sbjct: 609 AYLLAQAVVNRLSRLYDAGALEAVMDGVVIDLSSEAAAETSA-KALEAKLRDDALKPEVR 667

Query: 645 ASQYSVLVEHNAELNVYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEA 704
            +     V     L     K+    HG     +   +   + +Y +L + +    GLI A
Sbjct: 668 VTTMYDPVRELRSL-----KVARTHHGNQKISVFDEEFQLTADYQQLVNTANTFKGLIGA 722

Query: 705 GAFIKRGERVQPISSFAAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMM 764
           GA IKRGER   ++ F +A+ WL+ ++ R +S QRYKGLGEMNP QLWETTMDP  RR++
Sbjct: 723 GAVIKRGERSMAVTDFKSAMKWLLADAERNISKQRYKGLGEMNPGQLWETTMDPTVRRLL 782

Query: 765 QVTIEDAVGADELFTTLMGDQVEPRRAFIETNALKVANLDV 805
           +V IEDA+ AD +FTTLMGD VEPRRAFIE+NAL+  N+DV
Sbjct: 783 RVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV 823