Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., DNA recombination and repair protein RecF from Pseudomonas fluorescens FW300-N2E2

 Score =  268 bits (684), Expect = 2e-76
 Identities = 144/354 (40%), Positives = 210/354 (59%), Gaps = 7/354 (1%)

Query: 12  RNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRIIQNECSELFVH 71
           RN+       S   N L G NGSGKTSVLEA++LLG  RSF+S+    +IQ +     V 
Sbjct: 2   RNLHPVTFSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLLPVIQYDQLACTVF 61

Query: 72  GRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQLIHPEGFELLT 131
           G++      ++     +GI++ R G  +++I GQ  +  AQLA+ILPLQLI+P+ F LL 
Sbjct: 62  GQV----ELAEGGHSALGISRDRQGEFQIRIDGQNARSAAQLAEILPLQLINPDSFRLLE 117

Query: 132 DGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQ-SYRELSYWDQELARLA 190
             PK RR F+DWGVFH EP F   W R ++  +QRN+ L+         + WD+EL + +
Sbjct: 118 GAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAVSQAVWDRELCQAS 177

Query: 191 EQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSILEKNFERDQQLG 250
            +ID++R +Y+  LK V EQ     +    + L YYRGW+KD+   ++L  + +RDQQ+G
Sbjct: 178 AEIDEYRRAYIKALKPVFEQTLSELVELEGLTLSYYRGWDKDRELSTVLAGSLQRDQQMG 237

Query: 251 YTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTGKQCIYLIDDFA 310
           +T +GP +ADLR+++ A    D+LSRGQ KL+VCALR+AQG  +++    QCIYL+DD  
Sbjct: 238 HTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCIYLVDDLP 297

Query: 311 SELDSLRRQRLADSLKGTGAQVFVSSITESQVAD--MLDESSKTFHVAHGVIEQ 362
           SELD   R+ L   L+    QVF++ +    + +    +     FHV  G I Q
Sbjct: 298 SELDEAHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRITQ 351