Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., DNA recombination and repair protein RecF from Xanthomonas campestris pv. campestris strain 8004

 Score =  184 bits (468), Expect = 2e-51
 Identities = 120/363 (33%), Positives = 179/363 (49%), Gaps = 9/363 (2%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M ++RL I + R  +A +   ++  N L G NG+GKTSVLEA++++ +GRSF+  +   +
Sbjct: 1   MHVARLSIHRLRRFEAVEFHPASTLNLLTGDNGAGKTSVLEALHVMAYGRSFRGRVRDGL 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           I+    +L +     E +  S +     G+       T  ++ G+   +L  L   L + 
Sbjct: 61  IRQGGQDLEIFVEWRERAGDSTERTRRAGLRHSGQEWTG-RLDGEDVAQLGSLCAALAVV 119

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS 180
              P    L++ G + RR F+DWG+FH EP F   W R+ R  KQRNALLK     + L 
Sbjct: 120 TFEPGSHVLISGGGEPRRRFLDWGLFHVEPDFLALWRRYARALKQRNALLKQGAQPQMLD 179

Query: 181 YWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDID-LKYYRGWEKDQ-PYQSI 238
            WD ELA   E +   R  Y+ +L+     +     P   +  L +  GW + +      
Sbjct: 180 AWDHELAESGETLTSRRLQYLERLQERLVPVATAIAPSLGLSALTFAPGWRRHEVSLADA 239

Query: 239 LEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELT 298
           L    ERD+Q GYT  GP++AD     +A P +D LSRGQ KL   A  +AQ +      
Sbjct: 240 LLLARERDRQNGYTSQGPHRADWAPLFDALPGKDALSRGQAKLTALACLLAQAEDFAHER 299

Query: 299 GKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKT---FHV 355
           G+  I  +DD  SELD   + R+   L    AQV    IT +++   L ++ KT   FHV
Sbjct: 300 GEWPIMALDDLGSELDRHHQARVIQRLASAPAQVL---ITATELPPGLADAGKTLRRFHV 356

Query: 356 AHG 358
            HG
Sbjct: 357 EHG 359