Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., recombination protein F from Synechococcus elongatus PCC 7942

 Score =  101 bits (251), Expect = 4e-26
 Identities = 88/342 (25%), Positives = 159/342 (46%), Gaps = 26/342 (7%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M L  L +Q FRN +   ++  A    L+G N  GKT++LEA+ L    RS + S    +
Sbjct: 1   MFLHSLHLQHFRNYRDQTVQFQAPKTILLGENAQGKTNLLEAVELFSTLRSHRVSRDRDL 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           +Q       +   +       D  E  + I  Q+ G   V+  G+  ++   L   L   
Sbjct: 61  VQTGAESALLTAVV-----ERDSGEQQLQIQLQQQGRRRVQRDGEVLRRQLDLLGSLCSV 115

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSY--RE 178
                  +L+  GP+QRR ++D  +   +P +     ++ R+ +QRNALL+ A+S     
Sbjct: 116 QFSSLDLDLVRGGPQQRRDWLDRLLIQLQPIYAHLQQQYGRVLRQRNALLRRAESLDLAL 175

Query: 179 LSYWDQELARLAEQIDQWRESYVNQLKNVA-----------EQLCRTFLPEF--DIDLKY 225
           L+  + +LA+L   I + R   + +L  +A           EQL   + P      D   
Sbjct: 176 LAPLNWQLAQLGVHIMRRRSRAIQRLVPLAAHWHREISGQREQLIVAYQPSVLAPDDTDE 235

Query: 226 YRGWEKDQPYQSILEKNFERDQQLGYTFS--GPNKADLRIKVNATPVEDVLSRGQLKLMV 283
              W++    + + +    R  +LG   S  GP++ DL + +N T      S+GQ + +V
Sbjct: 236 AIAWQE----RMLAQIEARRAAELGQRTSLVGPHRDDLNLSINGTEARLQASQGQQRTLV 291

Query: 284 CALRVAQGQHLTELTGKQCIYLIDDFASELDSLRRQRLADSL 325
            +L++A+ + +  + G+  + L+DD  +ELD  R+Q+L +++
Sbjct: 292 LSLKLAELELIEAVLGEPPLLLLDDVLAELDLRRQQQLLEAI 333