Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., recombination protein F from Sinorhizobium meliloti 1021

 Score =  102 bits (255), Expect = 1e-26
 Identities = 96/367 (26%), Positives = 163/367 (44%), Gaps = 14/367 (3%)

Query: 3   LSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRIIQ 62
           L+RL +  FRN     + L      L G NG+GKT+++E +  L  GR  + +    + +
Sbjct: 7   LTRLKLSDFRNYATLALDLDQRHVVLTGENGAGKTNLMEGVSFLSPGRGLRRAAYADVAR 66

Query: 63  NECSELFVHGRICEHSLSSDQFELPVGINKQRDG-STEVKIGGQTGQKLAQLAQILPLQL 121
               + F      +    S   E+  G     +G S  ++I G   + + +L   L +  
Sbjct: 67  VGAPDGFSVFAAVDGMEGS--VEIGTGTQGTEEGQSRRLRINGTAARTVDELTDHLRVLW 124

Query: 122 IHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRE-LS 180
           + P    L T     RR F+D  V   +P        F R  + RN LL   +     LS
Sbjct: 125 LTPAMDGLFTGPSADRRRFLDRLVLSLDPEHGRRASEFDRAMRSRNRLLSEFRPDPAWLS 184

Query: 181 YWDQELARLAEQIDQWRESYVNQLKNVAEQLCR--TF------LPEFDIDLKYYRGWEKD 232
             ++E+A L   +   R+  +  L  + E+     TF      L  F  D      +E +
Sbjct: 185 AIEREMAGLGISMALARQEMLGLLSALVERSRSDGTFPSASLSLAGFLDDCAGIPAFELE 244

Query: 233 QPYQSILEKNFERDQQLGYTFSGPNKADLRIKVNATPVE-DVLSRGQLKLMVCALRVAQG 291
           + Y ++L +   RD   G T  GP+++DL I+     +E +  S G+ K ++  L +A  
Sbjct: 245 ERYLAMLAEGRARDAAAGRTLDGPHRSDLLIRHREKDIEAERCSTGEQKALLVGLVLAHA 304

Query: 292 QHLTELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSK 351
           + + ++TG   + L+D+ A+ LD  RR  L D + G G Q F++  T+  + D L E ++
Sbjct: 305 RLVGDMTGHAPVLLLDEIAAHLDQGRRAALFDLVDGLGGQSFMTG-TDRAMFDALGERAQ 363

Query: 352 TFHVAHG 358
              VA+G
Sbjct: 364 YLAVANG 370