Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., recombination protein F (RefSeq) from Shewanella amazonensis SB2B

 Score =  319 bits (818), Expect = 6e-92
 Identities = 168/365 (46%), Positives = 226/365 (61%), Gaps = 10/365 (2%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M LSRL I  FRNI +  +   AG N + G NGSGKTS+LEAIY LG GRSF+S L+ R+
Sbjct: 1   MSLSRLSIDAFRNIDSAQLAPGAGLNLIYGHNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60

Query: 61  IQNE--CSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILP 118
           IQN+  C  LF    + E      +    +G+ + R G TEVKI G+  ++L+QLA+ LP
Sbjct: 61  IQNDADCLTLFA---VAEGQAGDSR----IGLRRHRSGDTEVKIDGEKVKRLSQLAEALP 113

Query: 119 LQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRE 178
           +Q+I PE F LL +GP  RR FIDWG FH    F  AW   +R+ KQRN LL+   SY  
Sbjct: 114 IQVITPESFSLLFEGPSARRQFIDWGAFHASKQFHLAWMNTRRILKQRNQLLRDGASYEH 173

Query: 179 LSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSI 238
           +++WD+EL R A ++   R  YV  L  V + +   FLP+ DI + + RGW+    +  +
Sbjct: 174 IAFWDKELIRYALEVTAIRNDYVGSLNGVLKGIIGEFLPDVDIRVSFTRGWDSKTDFSEL 233

Query: 239 LEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELT 298
           L+  + RD  +G+T SGP+KADLR++V   P +D LSRGQLKL+VCALR+AQG+ L +  
Sbjct: 234 LQSQYARDLAIGHTVSGPHKADLRLRVGNLPAQDALSRGQLKLLVCALRIAQGKLLKQQI 293

Query: 299 GKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLD-ESSKTFHVAH 357
            K  IYL+DD  SELD+  RQ L   L  TGAQ+FV++I  S + D L     + FHV  
Sbjct: 294 DKHSIYLVDDLPSELDAKHRQLLLKELIDTGAQLFVTAIEPSAIVDSLPVPPDRMFHVQA 353

Query: 358 GVIEQ 362
           G + Q
Sbjct: 354 GRVTQ 358