Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., RecF protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 89/375 (23%), Positives = 153/375 (40%), Gaps = 20/375 (5%)

Query: 3   LSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTG---R 59
           + RL +  FR      + +      L GPNG+GKT++LEA+  L  GR  + +      R
Sbjct: 2   VERLTLTAFRCYDRLRLDVGPRPLVLTGPNGAGKTNLLEALSFLAPGRGLRRAALADPCR 61

Query: 60  IIQNECSELFVHGRICEH-------SLSSDQFELPVGINKQRDGSTE-VKIGGQTGQKLA 111
            +  + +       +  H              ++  G+ +   G    V+I G T  + A
Sbjct: 62  RVGGDAATAGPPWAVAAHLRLPAGPGTLGRGVDVGTGLERATAGERRLVRIDGATAGQAA 121

Query: 112 QLAQILPLQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLK 171
            L  +  +  + PE   L   G  +RR F+D  V   +P        + +  ++R  LL+
Sbjct: 122 -LGDLFSVLWLTPEMDGLFRGGASERRRFLDRLVNGLDPDHAGRTAAYAQAQRERARLLR 180

Query: 172 SAQSYRE-LSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDL-KYYRGW 229
             ++ R  L   +  +AR    I   R   V++L          F P   IDL     GW
Sbjct: 181 EGRASRGWLDGLEDVMARHGVAIVAARRDLVDRLGAAVRAATGPF-PGARIDLVSEVDGW 239

Query: 230 EKDQPY---QSILEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDV-LSRGQLKLMVCA 285
               P    +  L       +       GP++ DL ++     +  V  S G+ K ++ A
Sbjct: 240 LAAGPALAAEDRLRAALAMARGPEAPAPGPHRDDLAVRHGPKDIPAVQASTGEQKAVLIA 299

Query: 286 LRVAQGQHLTELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADM 345
           L +AQ +          + L+D+  + LD+ RR  L ++L G G Q +VS  TE+Q  D 
Sbjct: 300 LILAQARVQEAARAVAPLLLLDEGVAHLDAPRRAALGEALSGQGLQAWVSG-TEAQAFDS 358

Query: 346 LDESSKTFHVAHGVI 360
             ++++   +A G +
Sbjct: 359 WAKNAQFLRIAEGAV 373