Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., DNA replication and repair protein RecF (single-strand DNA binding protein) from Mycobacterium tuberculosis H37Rv

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 93/365 (25%), Positives = 153/365 (41%), Gaps = 44/365 (12%)

Query: 6   LMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRIIQNEC 65
           L ++ FR+    D+ L  G    +GPNG GKT+++EA++      S + S    +I+   
Sbjct: 6   LGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPLIRVGT 65

Query: 66  SELFV------HGRICEHSLSSDQFELPVG-INKQRDGSTEVKIGGQTGQKLAQLAQILP 118
               +       GR C   L     E+  G +NK R   + V+           +  +L 
Sbjct: 66  DRAVISTIVVNDGRECAVDL-----EIATGRVNKARLNRSSVR-------STRDVVGVLR 113

Query: 119 LQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYR- 177
             L  PE   L+   P  RR ++D       PA       ++R+ +QR ALLKS    R 
Sbjct: 114 AVLFAPEDLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARY 173

Query: 178 --------ELSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEF-DIDLKYYRG 228
                    L  WD  LA    ++   R   VNQL    ++  +   PE     + Y   
Sbjct: 174 RGDRGVFDTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRAS 233

Query: 229 WEKDQP-YQSILEKNF-----------ERDQQL--GYTFSGPNKADLRIKVNATPVEDVL 274
            +   P  QS +++              RD +L  G    GP++ DL +++   P +   
Sbjct: 234 MDVTGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFA 293

Query: 275 SRGQLKLMVCALRVAQGQHLTELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFV 334
           S G+   +  ALR+A  Q L  + G + + L+DD  +ELD +RR+ LA + +     +  
Sbjct: 294 SHGEAWSLAVALRLAAYQ-LLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVT 352

Query: 335 SSITE 339
           +++ E
Sbjct: 353 AAVLE 357