Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  122 bits (305), Expect = 2e-32
 Identities = 90/368 (24%), Positives = 174/368 (47%), Gaps = 10/368 (2%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M L R+ I  ++N++  +I  SA  N   G NG GKT++L+A+Y L   +S  + +  + 
Sbjct: 1   MILKRISILNYKNLEQVEIGFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSSGNPIDSQN 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           I++E  + FV     E   + D     +    +R    + K   +   + +     LPL 
Sbjct: 61  IRHE-QDFFVIQGFYE---AEDGTPEEIYCGMKRRSKKQFKRNKKEYSRFSDHIGFLPLV 116

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS 180
           ++ P   EL+  G  +RR F+D  +   +  + +A  R+ +   QRN LLKS     E  
Sbjct: 117 MVSPADSELIAGGSDERRRFMDVVISQYDKEYLEALIRYNKALAQRNTLLKSEFPVEEEL 176

Query: 181 Y--WDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSI 238
           +  W++ +A+  E + + RE+++ +   + +        + +     Y    +D     +
Sbjct: 177 FLVWEEMMAQAGEIVFRKREAFIEEFIPIFQSFYSFISQDKEQVGLSYDSHARDASLLEV 236

Query: 239 LEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELT 298
           L+++ ERD+ +G++  G +K +L + +   P++   S+GQ K  + AL++AQ   L    
Sbjct: 237 LKQSRERDKIMGFSLRGIHKDELNMLLGDFPIKKEGSQGQNKTYLVALKLAQFDFLKRTG 296

Query: 299 GKQCIYLIDDFASELDSLRRQRLADSLKGTG-AQVFVSSITESQVADMLDE---SSKTFH 354
               + L+DD   +LD+ R +++   + G    Q+F++      +  +L +     K F 
Sbjct: 297 QTVPLLLLDDIFDKLDASRVEQIVKLVAGDNFGQIFITDTNREHLDRILQKVGSDYKVFR 356

Query: 355 VAHGVIEQ 362
           V  GVI +
Sbjct: 357 VDQGVINE 364