Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., DNA replication and repair protein RecF from Bifidobacterium breve UCC2003

 Score =  100 bits (248), Expect = 8e-26
 Identities = 86/368 (23%), Positives = 155/368 (42%), Gaps = 38/368 (10%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M +SRL +  +R+     +    G N L+G NG GKT+++EA+ +L  G S ++S    +
Sbjct: 1   MHISRLALDHYRSWSQVVVDFVPGVNILVGKNGLGKTNLVEAVEVLSTGASHRASSMLPL 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           I+   +   +   + +    S  +E  +       G+   +I   T   L  +   +P  
Sbjct: 61  IERGQTTATIRANVVDDDGQSTTYEASI----HARGANRARINSGTSLYLRDIIGRIPSV 116

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRE-- 178
              PE   L++  P  RR  ++      EP +  +  +F R+ KQR  LLK   +     
Sbjct: 117 SFTPEDQRLVSGDPGARRTLLNQAGALLEPGYMQSLHQFTRIGKQRATLLKQLGASANTG 176

Query: 179 ---------LSYWDQELARLAEQIDQWRESYVN-----------QLKNVAEQLCRTFLPE 218
                    L  W  +      ++ + R   ++           +L    + +  T+ P 
Sbjct: 177 QPVDAVLSGLEIWTGQFIEAGVELTRMRARVIDLLAEPFAALYAELTGNDDTVSLTYAPS 236

Query: 219 FDIDLKYYRGWEKDQPYQSILEKNFER----DQQLGYTFSGPNKADLRIKVNATPVEDVL 274
           FD  L       +D P  SI E +F+R    +   G    GP + DL + +   P  +  
Sbjct: 237 FDEVLM------QDDPRLSISE-HFQRIYPGEVARGVNLIGPQRDDLTLNLADMPAREFA 289

Query: 275 SRGQLKLMVCALRVAQGQHLTELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFV 334
           S G++  M  AL++A  Q + +  G + I ++DD  ++LD  RR ++ D  +    QV +
Sbjct: 290 SNGEMWTMALALKMALFQVIRQRLGLRPIVILDDVFAQLDDNRRTQILDFARRQD-QVLI 348

Query: 335 SSITESQV 342
           +  +E  V
Sbjct: 349 TVASEGDV 356