Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., DNA polymerase III subunit beta from Synechococcus elongatus PCC 7942

 Score =  135 bits (340), Expect = 2e-36
 Identities = 88/374 (23%), Positives = 186/374 (49%), Gaps = 9/374 (2%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEEN--QLSMTATDLEVELISRVT 58
           MK    ++ L   L  VS  +  R + P+L N+LL  +    +LS+TA DL + + +   
Sbjct: 16  MKLVCRQNELNTSLSLVSRAVPSRPNHPVLANVLLAADAGTQRLSLTAFDLSLGIQTSFA 75

Query: 59  LEGEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPN 118
            + E  +G+IT+PA+   DI   LP+ + +T+        +  G  ++ +  + A +FP 
Sbjct: 76  AQVE-RSGAITLPAKLLNDIVSRLPNDSDVTLEDNDAAATLSVGSGQYQMRGISADEFPE 134

Query: 119 IEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMA 178
           +   QS+  + L+ + L   +  T F+ +  + +  L G+  ++    L   ATDGHR+A
Sbjct: 135 LPLVQSQEALQLSASALIEGLRGTLFATSGDETKQILTGVHLKVQPDGLEFAATDGHRLA 194

Query: 179 VAQAQLGA--DFAQKQIIVPRKGVLELVKL--LDAPEQPVVLQIGHSNLRAEVNHFVFTS 234
           V + +  A     +  + VP + + +L ++  +   ++ + L         +      TS
Sbjct: 195 VVKTENAAATPATEFAVTVPSRALRDLERMIAIRGSDEAIALYHDQGQTVFQWGDQYLTS 254

Query: 235 KLVDGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNL--ADNGMRI 292
           + +DG++P+Y +++P+  ++ +    + L  A  R A+L++++   +R++L   +N + +
Sbjct: 255 RTLDGQYPNYGQLIPREFNRNVAVDRKRLLAALERIAVLADQQNNAIRLSLDPENNRLAL 314

Query: 293 TANNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENV 352
             +  +    +E +     GEP+EI FNV Y+ + L  L   ++++ ++   +  ++  +
Sbjct: 315 AVDAQDVGSGQEAVPAEIIGEPLEIAFNVRYLAEGLKALNTTDIQIQLNSNTSPVVLSPL 374

Query: 353 DDDSAMYVVMPIRL 366
                 Y+VMPI+L
Sbjct: 375 GPVKITYLVMPIQL 388