Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., DNA polymerase III beta subunit-like protein from Phaeobacter inhibens DSM 17395

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 85/356 (23%), Positives = 154/356 (43%), Gaps = 33/356 (9%)

Query: 27  LPILGNLLLKVEENQLSMTATDLEVELISRVTLEGEF-EAGSITVPARKFLDICRGLPDS 85
           +PIL   L +VE  QL++TAT L+ E  +R TL  +  +A S  +   + + +  GL  +
Sbjct: 40  IPILSQNLFQVEGGQLAITATCLDRE--ARQTLSCDTSDAWSFVMNGHRVMKVTAGLSGT 97

Query: 86  AVITVLLEGDRIQVRSGRSRFSLATL-PASDFPNIEDWQSEVQVSLTQAELRGLIEKTQF 144
             I   +  D + + +     ++  + P  D+P     +    + + +  L   +   + 
Sbjct: 98  VTIEHDIAKDLLTLTANGMSLAMNVMAPPEDWPTTNKQEPLGGIEVGENTLLRALNLVKS 157

Query: 145 SMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVAQAQLGADFAQKQIIVPRKGVLELV 204
            ++ ++ RYYLNG+ +       R V T+GHR+  A+  L A      +I PR G+  L 
Sbjct: 158 CISTEETRYYLNGIYWTSHDGASRMVTTNGHRL--ARLDLEAPNPPFDVIFPRIGITPLA 215

Query: 205 KLL-------------DAPEQPVVLQIGHSNLRAEVNHFVFTSKLVDGRFPDYRRVLPQH 251
            +L              A + P +L I       E+       KL+DG +PDY RV+P  
Sbjct: 216 AMLTANGNQLAKITYRGADKTPTLLSI-------EMGDRELHCKLIDGTYPDYNRVIPSV 268

Query: 252 TSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNPEQEEAEELLDVSFE 311
             +         + A  R  +++     G +++     M I     E  + +  +  + +
Sbjct: 269 DGEQ-AFDIIIPKSATQRLRLMAGPHDLGCKISPEKGTMTI---GREDHDGKMSVTYAAK 324

Query: 312 GEP-IEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENVDDDSAMYVVMPIRL 366
           G+   +IGFN  Y+     T+   N+R+   D  A AL  +      + V+MP+R+
Sbjct: 325 GKSGPDIGFNTLYLAQTTATM--GNIRLRAKDNGAPALATSEAHTDLIMVLMPMRV 378