Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., DNA polymerase III, beta subunit (RefSeq) from Shewanella loihica PV-4

 Score =  410 bits (1055), Expect = e-119
 Identities = 203/366 (55%), Positives = 274/366 (74%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           MKF+I+R  L+KPLQ VSG +  R +LPIL NLL++V  + L +T TDLEVEL+ +  L+
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAELQ 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPNIE 120
           GE + G  TVPA+KFLDI + LPD   + +  + +R+ +RSGRSRF+LATLPA ++PN++
Sbjct: 61  GEVQEGRTTVPAKKFLDIVKSLPDQVELKIEQQDNRLLLRSGRSRFTLATLPAEEYPNVD 120

Query: 121 DWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVA 180
            +Q++++ +L Q  L+ LI+ TQFSMANQDVRYYLNG+L E +G  LR++ATDGHR+A++
Sbjct: 121 AFQADIEFTLKQGTLKSLIDATQFSMANQDVRYYLNGLLLETEGNVLRAIATDGHRLALS 180

Query: 181 QAQLGADFAQKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLVDGR 240
              +     +KQ+IVPRKGVLEL +L +  +  V L IG + +RA     VFTSKLVDGR
Sbjct: 181 HRMVQDSLPEKQVIVPRKGVLELQRLFEGEDLDVTLSIGENAIRATTQSAVFTSKLVDGR 240

Query: 241 FPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNPEQE 300
           FPDYRRVLP+   K +      L+QA  RA+ILSNEKFRGVRV L  N ++ITANNPEQE
Sbjct: 241 FPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLEQNLIKITANNPEQE 300

Query: 301 EAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENVDDDSAMYV 360
           EAEE+LD+ ++  P+EIGFNVSY+LDVLN L  D+VR+++ D N+SAL+EN  ++ +MYV
Sbjct: 301 EAEEILDIEYDNAPLEIGFNVSYLLDVLNNLPSDDVRITLIDGNSSALIENHVEEDSMYV 360

Query: 361 VMPIRL 366
           VMP+RL
Sbjct: 361 VMPMRL 366