Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., DNA polymerase III (beta chain) DnaN (DNA nucleotidyltransferase) from Mycobacterium tuberculosis H37Rv

 Score =  138 bits (348), Expect = 2e-37
 Identities = 114/394 (28%), Positives = 181/394 (45%), Gaps = 34/394 (8%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           + F + R      +  V+  L  R ++P+L  +LL   +N L+++  D EV   ++V  E
Sbjct: 13  LTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVGAE 72

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPNIE 120
                GS+ V  R   DI R LP+  V  V +EG+R+ +  G +RFSL T+P  D+P + 
Sbjct: 73  -IVSPGSVLVSGRLLSDITRALPNKPV-DVHVEGNRVALTCGNARFSLPTMPVEDYPTLP 130

Query: 121 DWQSEVQVSLTQAELRG-LIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAV 179
               E    L  AEL    I +   +    D    L G+  EI G T+   ATD  R+AV
Sbjct: 131 TLPEET--GLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDRFRLAV 188

Query: 180 AQAQLGADFA--QKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSN-------LRAEVNHF 230
            + +  A     +  ++VP K + E  K        V L +G          L    N  
Sbjct: 189 RELKWSASSPDIEAAVLVPAKTLAEAAKA-GIGGSDVRLSLGTGPGVGKDGLLGISGNGK 247

Query: 231 VFTSKLVDGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGM 290
             T++L+D  FP +R++LP   +        EL +A    A++++   + VR+  AD  +
Sbjct: 248 RSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQ-VRMEFADGSV 306

Query: 291 RITANNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVE 350
           R++A   +   AEE L V + GEP+ I FN +Y+ D L++LR + V    + A   AL+ 
Sbjct: 307 RLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLR 366

Query: 351 NVDDDSA------------------MYVVMPIRL 366
            V  D                    +Y++MP+RL
Sbjct: 367 PVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRL 400