Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., DNA polymerase III, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  400 bits (1029), Expect = e-116
 Identities = 197/366 (53%), Positives = 273/366 (74%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           MKF+I+R  L+KPLQ V G +  R +LPIL NLL++V  + L +T TDLEVEL+ +  + 
Sbjct: 1   MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAVIH 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPNIE 120
           G+ E G  TVPA+K LDI + LP+ + + V  + ++  +RSGRSRFSLATLPA ++PN+E
Sbjct: 61  GDIEEGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEEYPNVE 120

Query: 121 DWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVA 180
            +Q+E++ +L Q  L+ LI+ TQFSMANQDVRYYLNG+L E +G  LR++ATDGHR+A++
Sbjct: 121 AFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLIETEGNMLRAIATDGHRLALS 180

Query: 181 QAQLGADFAQKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLVDGR 240
              + A   +KQ+IVPRKGV+E+ +LL+  +  + + IG + +RA  +  VFTSKLVDGR
Sbjct: 181 HRVIEAQLPEKQVIVPRKGVMEMARLLETDDLDIAISIGDNAIRATTSTTVFTSKLVDGR 240

Query: 241 FPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNPEQE 300
           FPDYRRVLP+   K +       +QA +RA+ILSNEKFRGVR+ L    ++ITANNPEQE
Sbjct: 241 FPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITANNPEQE 300

Query: 301 EAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENVDDDSAMYV 360
           EAEE++DV +   P+EIGFNVSY+LDVLN L+ D+VR+++ D N+SAL+EN  ++ +MYV
Sbjct: 301 EAEEIIDVDYNNLPLEIGFNVSYLLDVLNNLKSDDVRITLIDGNSSALLENHLEEDSMYV 360

Query: 361 VMPIRL 366
           VMP+RL
Sbjct: 361 VMPMRL 366