Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., DNA polymerase III, beta subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  101 bits (251), Expect = 4e-26
 Identities = 81/374 (21%), Positives = 169/374 (45%), Gaps = 9/374 (2%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           M   + +  +I+ LQ+ +  +  +     L ++ L   +  LS+ ATD  +E     T E
Sbjct: 1   MYLKVYKEDVIEGLQKAANIIPAKTGAAYLRSIWLNAADGTLSVMATDSNIEFRGTYTAE 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVL-LEGDRIQVRSGRSRFSLATLPASDFPNI 119
              E G   V  R F+D+ R LP   ++  L  E + +++  GR ++ L       F N 
Sbjct: 61  VT-EPGLAGVQGRAFVDLLRKLPAGEIVLQLDAEANVLRIEQGRRKYKLPVNDPVWFQNF 119

Query: 120 EDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFE-IDGTTLRSVATDGHRMA 178
            D+ ++  V  +   L+ LI++  F ++++D    +  +  + +    + +   +GH+ A
Sbjct: 120 SDFPADGAVVWSGDFLQELIDRIAFCISDEDAVEAIACLFMKPVAEGRIEACGLNGHQFA 179

Query: 179 VAQA---QLGADFAQKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSK 235
           + +     L A    + ++V +K + EL K L A E  + +     +LR       F+  
Sbjct: 180 MLRFLHDDLHAKLPAEGVLVQKKYLGELKKWLGADEIELNISEKRMHLRTGDGRETFSLP 239

Query: 236 LVDGRFPDYRRVLPQHTSK---TLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRI 292
           L   ++PDY   + +   +    L+   +E   A  R  I +++  R    +L+   + +
Sbjct: 240 LSSYQYPDYMNFIAKLQGEGVSNLEVDRKEGMDALDRLQIFNSDNNRCTYFDLSGGEVVL 299

Query: 293 TANNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENV 352
           TA   +   A E L+ S++G+   I F    ++D++N  +   +R++++ A     +   
Sbjct: 300 TAQGQDVGSASESLEASYDGDIRRIAFPTRNLIDIMNHYQSGRLRLTLTGAEGPCGISGE 359

Query: 353 DDDSAMYVVMPIRL 366
           +D     +VMP+++
Sbjct: 360 EDPEYQVIVMPMKI 373