Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Chromosomal replication initiator protein DnaA from Pseudomonas fluorescens FW300-N2E2

 Score =  610 bits (1572), Expect = e-179
 Identities = 316/504 (62%), Positives = 374/504 (74%), Gaps = 41/504 (8%)

Query: 5   LWLQCLQRLQEELPAAEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNNINRLLM 64
           LW QC++ L++ELPA +F+ W+RPLQ E   + L ++APNRFVLDWV +KYL  +  LL 
Sbjct: 3   LWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRVMELLD 62

Query: 65  EFSGNDVPNLRFEVGSR--------------------------PV---VAPKPAPV---R 92
           E      P L   +GS+                          PV    AP PAP    R
Sbjct: 63  EHGNGMAPALSLLIGSKRSSAPRAAPNAPLAAAASQAQQAATAPVNNHAAPAPAPAPSKR 122

Query: 93  TAADVAAESSAPAQ---------LAQRKPIHKTWDDDSAAADITHRSNVNPKHKFNNFVE 143
            A  VA  S  P++          +Q+ P+            + H S +N    F NFVE
Sbjct: 123 NAQKVAEVSEEPSRDSFDPMAGASSQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVE 182

Query: 144 GKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAKVVYMHS 203
           GKSNQL  AAA QV+DNP   YNPLFLYGG GLGKTHL+HAVGN ++  NPNAKVVY+HS
Sbjct: 183 GKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHS 242

Query: 204 ERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQ 263
           ERFV DMVKALQ NAI EFKR+YRSVDALLIDDIQFFA KERSQEEFFHTFNALLEG QQ
Sbjct: 243 ERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQ 302

Query: 264 IILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLPDEVAF 323
           +ILTSDRYPKEI G+E+RLKSRFGWGLTVA+EPPELETRVAILMKKA+  ++ LP + AF
Sbjct: 303 VILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAF 362

Query: 324 FIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTV 383
           FIA+R+RSNVRELEGAL RVIA+++F GR ITI+ +RE+L+DLLALQ+KLV++DNIQ+TV
Sbjct: 363 FIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTV 422

Query: 384 AEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRK 443
           AEYYKIK++DLLSKRRSRSVARPRQ+AMAL+KELTNHSLPEIGD FGGRDHTTVLHACRK
Sbjct: 423 AEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRK 482

Query: 444 IEQLREESHDIKEDYSNLIRTLSS 467
           I +L+E   DI+EDY NL+RTL++
Sbjct: 483 INELKESDADIREDYKNLLRTLTT 506