Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Chromosomal replication initiator protein DnaA from Acidovorax sp. GW101-3H11

 Score =  441 bits (1134), Expect = e-128
 Identities = 231/463 (49%), Positives = 315/463 (68%), Gaps = 13/463 (2%)

Query: 5   LWLQCLQRLQEELPAAEFSMWVRPLQAELNDN--TLTLFAPNRFVLDWVRDKYLNNINRL 62
           LW  C+++L ++LP  +F+ W++PL A++ ++   +TL   NRF LDW+R +Y   I  L
Sbjct: 21  LWQACVEQLAQDLPEQQFNTWIKPLVAQVAEDFSKVTLLVANRFKLDWIRAQYAGRIASL 80

Query: 63  LMEFSGNDVPNLRFEVGSRPVVAPKPAPVRTAADVAAESSAPAQLAQRKPIHKTWDDDSA 122
           L    G  V +L   +  R  V      VR A+   + + APA+         + D+  A
Sbjct: 81  LEGLYGQPV-SLELALAQRESVTR--TYVRPASPEPSSAPAPAESPAA-----SIDEAPA 132

Query: 123 AADITHRSNVNPKHKFNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLL 182
            A    R+ +N    F   VEG +N++  +AA  V+  PG  YNPLF+YGG GLGKTHL+
Sbjct: 133 GA---FRNRLNAALTFETLVEGTANRMARSAAMHVAGMPGHLYNPLFIYGGVGLGKTHLM 189

Query: 183 HAVGNAIVDNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFAN 242
           HAVGN ++ + P+AKV+Y+H+E+FV D+VKA Q    +EFK  Y S+D LLIDD+QFFAN
Sbjct: 190 HAVGNRLLQDKPDAKVLYIHAEQFVSDVVKAYQRRTFDEFKERYHSLDLLLIDDVQFFAN 249

Query: 243 KERSQEEFFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETR 302
           K+R+QEEFF+ F ALL     I++TSD YPK ++ + DRL SRF  GLTVA+EPPELE R
Sbjct: 250 KDRTQEEFFNAFEALLTKKSHIVMTSDTYPKGLTNIHDRLVSRFDSGLTVALEPPELEMR 309

Query: 303 VAILMKKAEDHQIHLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREA 362
           VAIL+ KA      +P+EVAFF+AK +RSNVRELEGAL +++A + F  + I+I   REA
Sbjct: 310 VAILINKARVEGTEMPEEVAFFVAKNVRSNVRELEGALRKILAYSRFNQKEISIQLAREA 369

Query: 363 LRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNHSL 422
           LRDLL++Q + ++++NIQKTVA+YYKIKVAD+ SK+R  S+ARPRQ+AM LAKELT  SL
Sbjct: 370 LRDLLSIQNRQISVENIQKTVADYYKIKVADMYSKKRPASIARPRQIAMYLAKELTQKSL 429

Query: 423 PEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDYSNLIRTL 465
           PEIG+ FGGRDHTTVLHA RKI   R++  ++ +    L +TL
Sbjct: 430 PEIGELFGGRDHTTVLHAVRKISGERQQLTELNQQLHVLEQTL 472