Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., chromosomal replication initiation protein from Synechococcus elongatus PCC 7942

 Score =  326 bits (835), Expect = 1e-93
 Identities = 177/446 (39%), Positives = 272/446 (60%), Gaps = 14/446 (3%)

Query: 5   LWLQCLQRLQEELPAAEFSMWVRPLQAELNDN-TLTLFAPNRFVLDWVRDKYLNNINRLL 63
           LW Q L+RLQ +L    F  W++   AE  D   L L  PN F  +W++  YL  I  + 
Sbjct: 28  LWEQILERLQHQLSRPTFETWIKTATAEAFDGKVLRLSTPNPFARNWLQKYYLRTIADVA 87

Query: 64  MEFSGNDVPNLRFEVGSRPVVAPKPAPVRTAADVAAESSAPAQLAQRKPIHKTWDDDSAA 123
            E  G+ +     ++G   V++   A   + A++    S P  +   KP   T     A 
Sbjct: 88  AEILGHGI---ELQIG---VLSDTSAEPESGAELWPAISPPPAVEVVKPPTTT-----AG 136

Query: 124 ADITHRSNVNPKHKFNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLH 183
                 S++NPK+ F+ FV G +N++  AA+  +++ PG  YNPLFL GG GLGKTHL+ 
Sbjct: 137 RPPLRSSDLNPKYVFSRFVVGANNRMAHAASLAIAEYPGREYNPLFLCGGVGLGKTHLMQ 196

Query: 184 AVGNAIVDNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANK 243
           A+G+  ++ +P+AK+ Y+ +E+F  D++ A++ ++++ F+ +YR+ D +++DDIQF   K
Sbjct: 197 AIGHYRLEIDPDAKIFYVSTEQFTNDLIAAIRRDSMQSFREHYRAADVIMVDDIQFIEGK 256

Query: 244 ERSQEEFFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRV 303
           E +QEEFF+TFN+L E  +QI+L SDR P +I  +++RL SRF  GL   I+PP+ ETRV
Sbjct: 257 EYTQEEFFYTFNSLHEAGKQIVLASDRPPSQIPRLQERLISRFSMGLIADIQPPDFETRV 316

Query: 304 AILMKKAEDHQIHLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREAL 363
           AIL KK+E   + LP +V  +IA R  SN+RELEGAL R +A A+ +G  +T+  +   L
Sbjct: 317 AILQKKSEFENMPLPRDVIEYIAARYTSNIRELEGALTRAVAYASISGLALTLANIAPVL 376

Query: 364 RDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNHSLP 423
                  E  ++ + I +TVAE + + + DL    R R V+  RQ+ M L ++ T+ SLP
Sbjct: 377 TPPTEKME--LSPEMILQTVAETFDVSIEDLRGNSRRREVSLARQVGMYLMRQHTDLSLP 434

Query: 424 EIGDAFGGRDHTTVLHACRKIEQLRE 449
           +IG+ FGG+DHTTV+++C KI QLR+
Sbjct: 435 KIGEQFGGKDHTTVMYSCEKIGQLRQ 460