Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., chromosomal replication initiator protein, DnaA (NCBI) from Rhodospirillum rubrum S1H

 Score =  353 bits (907), Expect = e-102
 Identities = 200/487 (41%), Positives = 293/487 (60%), Gaps = 24/487 (4%)

Query: 3   SSLWLQCLQRLQEELPAAEFSMWVRPLQ-AELNDNTLTLFAPNRFVLDWVRDKYLNNINR 61
           S+ W +    L+ E   + +  WV P+      +  + L  P RF+ DWV + Y + I R
Sbjct: 25  SASWDRVRGFLKREFGDSAYRTWVVPMTLVAAVEGEVRLAVPTRFMRDWVMNHYGDRI-R 83

Query: 62  LLMEFSGNDVPNLRFEVGSRPVVAPKPAPVRTAADVA------------AESSAP--AQL 107
            L     + +  + F V S P  AP PA     AD A            AE+ AP  A  
Sbjct: 84  SLWAAEDSSIRYVDFIVESAPAPAP-PARAGQDADRAEGASDPAAGQRPAEAGAPRPAAR 142

Query: 108 AQRKPIHKTWDDDSAAADITHR-------SNVNPKHKFNNFVEGKSNQLGLAAARQVSDN 160
           A R  +    +  +  AD           + ++P+  F+NFV GK N+   AAA++V+D+
Sbjct: 143 ASRTMVRVAAEGGAEGADSAPAPLDDGISAPLDPRFTFDNFVVGKPNEFAYAAAKRVADS 202

Query: 161 PGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAKVVYMHSERFVQDMVKALQNNAIE 220
            G A+NPLFLYGG GLGKTHL+HA+   I + +P+ +V+Y+ +E+F+   ++AL+     
Sbjct: 203 TGVAFNPLFLYGGVGLGKTHLMHAIARGIREASPHRRVIYLSAEQFMHRFIRALRQQDTM 262

Query: 221 EFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEISGVED 280
            FK  +RSV+ L++DDIQF + K+ +QEEFFHTFNAL++   QI+L++D+ P ++  +  
Sbjct: 263 SFKEQFRSVEVLMVDDIQFISGKDSTQEEFFHTFNALVDQGSQIVLSADKSPTDLENIGA 322

Query: 281 RLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLPDEVAFFIAKRLRSNVRELEGAL 340
           RL+SR   GL   + P   E R+ IL  KAE   + +P++V  FIA ++ SN RE+EGAL
Sbjct: 323 RLRSRMACGLVADLHPTTYELRLGILESKAEHMGVSVPEKVLEFIAHKIASNGREVEGAL 382

Query: 341 NRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRS 400
            R+IA+A   GR +T++  ++ L DLL   +K VT+D IQK VAE++KI++AD+ S RR+
Sbjct: 383 IRLIAHAQLVGRDLTLETAQDVLHDLLRTYDKRVTVDEIQKKVAEHFKIRLADMHSARRA 442

Query: 401 RSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDYSN 460
           R+VARPRQ+AM L K+LT+ SLPEIG +FGGRDHTTV+HA RK+E+L        ED   
Sbjct: 443 RAVARPRQVAMYLCKQLTSRSLPEIGKSFGGRDHTTVMHAVRKVEELILADGTFAEDVEL 502

Query: 461 LIRTLSS 467
           L R L +
Sbjct: 503 LRRMLEA 509