Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

 Score =  743 bits (1918), Expect = 0.0
 Identities = 375/467 (80%), Positives = 411/467 (88%), Gaps = 8/467 (1%)

Query: 1   MSSSLWLQCLQRLQEELPAAEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNNIN 60
           M+ SLW QC+ RLQ+EL A +FSMW+RPLQAE++  TL L+APNRFVLDWVRDKYLN IN
Sbjct: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN 60

Query: 61  RLLMEFSGNDVPNLRFEVGSRPVVAPKPAPVRTAADVAAESSAPAQLAQRKPIHKTWDDD 120
           +   E  G+D P LRF++GSRP  A KPA        AA + +P   A + P   +++ +
Sbjct: 61  QFFTEQMGSDAPKLRFDIGSRP--ASKPAAP------AASTKSPVAPAAKSPSKPSFNSN 112

Query: 121 SAAADITHRSNVNPKHKFNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTH 180
             AA   HRSN+NP ++F+NFVEGKSNQLG AAA QVS+NPG AYNPLFLYGGTGLGKTH
Sbjct: 113 EPAATANHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTH 172

Query: 181 LLHAVGNAIVDNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFF 240
           LLHAVGN I+ NNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDAL IDDIQFF
Sbjct: 173 LLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFF 232

Query: 241 ANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELE 300
           ANK+RSQEEFFHTFNALLEGN Q+ILTSDRYPKEI GVEDRLKSRFGWGLTVAIEPPELE
Sbjct: 233 ANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELE 292

Query: 301 TRVAILMKKAEDHQIHLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVR 360
           TRVAILM+KA++  I+LPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVR
Sbjct: 293 TRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVR 352

Query: 361 EALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNH 420
           EALRDLLALQEKLVTIDNIQKTVAEYYKIK+AD+LSKRRSRSVARPRQ+AMAL+KELTN 
Sbjct: 353 EALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQ 412

Query: 421 SLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDYSNLIRTLSS 467
           SLPEIGDAFGGRDHTTVLHACRKI QLREESHDIKEDY+NLIRTLSS
Sbjct: 413 SLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 459