Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., chromosomal replication initiator protein DnaA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  736 bits (1901), Expect = 0.0
 Identities = 372/468 (79%), Positives = 409/468 (87%), Gaps = 9/468 (1%)

Query: 1   MSSSLWLQCLQRLQEELPAAEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNNIN 60
           M+ SLW QC+ RLQ+EL A +FSMW+RPLQAE++ +TL L+APNRFVLDWVRDKY+N IN
Sbjct: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIIN 60

Query: 61  RLLMEFSGNDVPNLRFEVGSRPVVA-PKPAPVRTAADVAAESSAPAQLAQRKPIHKTWDD 119
           +   E  GND P LRF++GSRP    P+PAPV      + ++ A    A        ++ 
Sbjct: 61  QFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASVGTA--------FNT 112

Query: 120 DSAAADITHRSNVNPKHKFNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKT 179
               A+  HRSN+NP ++F+NFVEGKSNQLG AAA QV++NPG AYNPLFLYGGTGLGKT
Sbjct: 113 TEPVANTNHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKT 172

Query: 180 HLLHAVGNAIVDNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQF 239
           HLLHAVGN I+ NNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDAL IDDIQF
Sbjct: 173 HLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQF 232

Query: 240 FANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPEL 299
           FANK+RSQEEFFHTFNALLEGN QIILTSDRYPKEI GVEDRLKSRFGWGLTVAIEPPEL
Sbjct: 233 FANKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPEL 292

Query: 300 ETRVAILMKKAEDHQIHLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFV 359
           ETRVAILM+KA++  I+LPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFV
Sbjct: 293 ETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFV 352

Query: 360 REALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTN 419
           REALRDLLALQEKLVTIDNIQKTVAEYYKIK+AD+LSKRRSRSVARPRQ+AMAL+KELTN
Sbjct: 353 REALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSKELTN 412

Query: 420 HSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDYSNLIRTLSS 467
            SLPEIGDAFGGRDHTTVLHACRKI QLREESHDIKEDY+NLIRTLSS
Sbjct: 413 QSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 460