Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., L-Arginine ABC transporter, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 72/246 (29%), Positives = 109/246 (44%), Gaps = 7/246 (2%)

Query: 8   ALAALALSSATVQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKRNDYKVEFV 66
           ALA   LS  T      +K+G+   Y PF     D  + GF+ D+ N + +    K  +V
Sbjct: 9   ALALSVLSLPTFADEKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEMKVKCVWV 68

Query: 67  TANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGIDD 126
              F GL+  L+  +ID I + ++IT+ RK    F++ Y    A++ ++ G +    + +
Sbjct: 69  EQEFDGLIPALKVRKIDAILSSMSITEDRKKSVDFTNKYYNTPARLVMKAGTQVSDNLAE 128

Query: 127 LAGKTVAVNLGSNFEQLLRNHDKDGKINIKTY--DTGIEHDVALGRADAFVMDRLSALEL 184
           L GK + V  GS  E+  R         IK Y     I  DV+ GR D  V D     + 
Sbjct: 129 LKGKNIGVQRGSIHERFAREVLAPLGAEIKPYGSQNEIYLDVSAGRLDGTVADATLLDDG 188

Query: 185 IEKT--GLPLQLAGSPF--ETIENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIALK 240
             KT  G      G  F  E        +   KG  L+ ++N A+ A+R +G   QI  K
Sbjct: 189 FLKTDAGKGFAFVGPAFTDEKYFGDGIGIAVRKGDALKDKINGAITAIRENGKYKQIQDK 248

Query: 241 WFGTDI 246
           +F  DI
Sbjct: 249 YFAFDI 254