Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Diaminopimelate-binding protein / L-cystine-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  149 bits (377), Expect = 4e-41
 Identities = 86/227 (37%), Positives = 134/227 (59%), Gaps = 6/227 (2%)

Query: 25  VKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKRNDYKVEFVTANFSGLLGLLETGRID 83
           + VG+ G Y PF+FV +  +L GFEV+    + K    K +   + + G+L  L++ R+D
Sbjct: 42  LNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKELGVKAKIQPSKWDGILAALDSKRLD 101

Query: 84  TISNQITITDARKAKYLFSDPYVIDGAQITVRKGN-EAIKGIDDLAGKTVAVNLGSNFEQ 142
            + NQ+TI+D RK KY FS+PY I G Q  V K N + IK + DL+GK V V LG+N+E+
Sbjct: 102 VVINQVTISDERKKKYDFSEPYTISGIQALVLKKNADTIKSVKDLSGKKVGVGLGTNYEE 161

Query: 143 LLRNHDKDGKINIKTYDTGIEHDVALGRADAFVMDRLSALELIEKTGLPLQLAGSPFETI 202
            L+ +  D  +     D     D+++GR DA ++DRL+ALE+  KT   L  AG  F   
Sbjct: 162 WLKANVPDAIVKTYDDDPSKIQDLSVGRIDAILVDRLAALEMAAKTKNKLVPAGEAFSRQ 221

Query: 203 ENAWPFVNNEKGQ-QLQGEVNKALAAMRADGTLSQIALKWFGTDISQ 248
            +    +   KG+ +L   ++KA+  +RADGTL +++ K+F  D++Q
Sbjct: 222 ASG---IALRKGEPELLAAIDKAIDKLRADGTLKKLSEKYFNADVTQ 265