Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., amino acid-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  128 bits (321), Expect = 1e-34
 Identities = 85/233 (36%), Positives = 131/233 (56%), Gaps = 8/233 (3%)

Query: 19  VQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKRNDYKVEFVTANFSGLLGLL 77
           V++A  +K+G  G Y PFT+      L GF+V++  E+ KR   K EF+   + GL+  L
Sbjct: 30  VKSAGVLKIGTEGTYAPFTYHDASGALVGFDVEIGQEVAKRLGVKPEFLEGKWDGLIAGL 89

Query: 78  ETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKTVAVNLG 137
           +  R D + NQ+ IT+ RK KY FS+PY+   A + VR  +E IK   DL GK  A +L 
Sbjct: 90  DANRYDAVINQVGITEERKKKYDFSEPYIASKAVLIVRGDDEEIKDFADLKGKKSAQSLT 149

Query: 138 SNFEQLLRNHDKDGKINIKTYDTGIEHDVALGRADAFVMDRLSALEL-IEKTGLPLQLAG 196
           SNF +L +    +  +    +D  I+  V  GRADA + D LS L+   +K    +++A 
Sbjct: 150 SNFGKLAQASGAE-LVGTDGFDQSIQL-VLTGRADATINDSLSFLDFKKQKPDANVKIAA 207

Query: 197 SPFETIENAWPFVNNEKGQ-QLQGEVNKALAAMRADGTLSQIALKWFGTDISQ 248
              E  +  +  +   KG+ +L   +NKALA ++ADGT  +I+ K+FG D+S+
Sbjct: 208 ---EKPDADYSGIIIRKGEPELLEAINKALAEIKADGTYEKISQKYFGADVSK 257