Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 5/219 (2%)

Query: 25  VKVGMSGRYFPFTFVKQDELQGFEVDVWNEIGKRNDYKVEFVTANFSGLLGLLETGRIDT 84
           + VG      P ++++  E +GFEV++  EI KR D K EF+  +FS LL  +  G +D 
Sbjct: 32  LNVGACTDLAPTSYLEDGEFKGFEVELIYEISKRLDLKPEFIAYSFSELLDAVSEGNVDC 91

Query: 85  ISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKTVAVNLGSNFEQLL 144
               I  T  R+ K  FS  Y    + I V++ +E + GI  L  K+V V   S  E+ L
Sbjct: 92  GIGYIGRTPERQLKMDFSRQYAYTYSSILVKQNSECV-GIKCLEHKSVGVLKDSIEEKWL 150

Query: 145 RNHDKDGKINIKTYD--TGIEHDVALGRADAFVMDRLSALELIEKTGLPLQLAGSPFETI 202
            +  K    +I +Y+    I  D+  G+ D+ V D L++L LI+K    L++ G  F+ I
Sbjct: 151 ESLSKSMDFDIISYENQNDIHKDLLSGKIDSEVTDHLTSLYLIQKYNSELKIIGDKFDII 210

Query: 203 ENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIALKW 241
             A    N     +L+  ++ AL  M  DGTL ++  KW
Sbjct: 211 YIAIAIDNT--NPELKKSIDAALLEMENDGTLVKLKEKW 247