Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., histidine ABC transporter substrate-binding protein HisJ from Klebsiella michiganensis M5al

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 24/257 (9%)

Query: 6   NIALAALALSSATVQAATEVKVGMSGRYFPFTFVK-QDELQGFEVDVWNEIGKRNDYKVE 64
           ++ +   + SSA       +++G    Y PF+    + +  GF++D+ NE+  R   K  
Sbjct: 9   SLMMGICSASSAFAALPQSIRIGTDATYAPFSSKDAKGDFVGFDIDLGNELCSRIKVKCT 68

Query: 65  FVTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGI 124
           +V ++F  L+  L+  +ID I + ++IT+ R+ +  FSD      +++   KG+     +
Sbjct: 69  WVGSDFDSLIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAAKGSPIQPTL 128

Query: 125 DDLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYDTG--IEHDVALGRADAFVMDRLSAL 182
           + L GK V V  GS  E       +   +++  Y     I  D++ GR DA + D ++A 
Sbjct: 129 ESLKGKHVGVLQGSTQEAYGNERWRSHGVDVVAYQNQDLIYSDLSAGRLDAALQDEVAAS 188

Query: 183 ELIEKTGLPLQLAGSPFETIENAWPFVNNEK-------------GQQLQGEVNKALAAMR 229
           E     G   Q AG  F     A P V ++K               +L+   +KALA MR
Sbjct: 189 E-----GFLKQPAGKDFAF---AGPSVKDKKFFGDGTGIGLRKDDSELKAAFDKALADMR 240

Query: 230 ADGTLSQIALKWFGTDI 246
            DGT  ++A K+F  ++
Sbjct: 241 KDGTYDKMAKKYFDFNV 257