Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., ABC transporter permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  122 bits (307), Expect = 6e-33
 Identities = 75/213 (35%), Positives = 121/213 (56%), Gaps = 16/213 (7%)

Query: 22  TLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQV 81
           T+ MA   +   ++  +  A +R+   P+L  ++ +Y   FRGTPL++QL LL++ L  +
Sbjct: 79  TVVMAVLAMALGIVFGVITAIMRMSANPILRYVALIYTWLFRGTPLILQL-LLWFNLALI 137

Query: 82  FPL-----LVGLDA------FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGM 130
           FP      L  +D       F AA++GL+++  AY AE +RA ++ +D  Q EA+ S+GM
Sbjct: 138 FPTIGIPGLFEMDTVSLMTPFVAALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGM 197

Query: 131 TTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFE 190
              QA+RRIILPQA R+ +P + N FI M+K TSLA  +  +E++  AQ    ++ R  E
Sbjct: 198 PRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSELLYNAQNIYYANARVME 257

Query: 191 AFLAVALIYWVVVLVLTRLQSWAEQKLNKAYAR 223
             +   + Y   V VL    S+ + +L + +AR
Sbjct: 258 LLIVAGIWYLATVTVL----SFGQSRLERRFAR 286