Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  183 bits (464), Expect = 3e-51
 Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 3/211 (1%)

Query: 9   LELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLL 68
           L+  P LLK    T+ ++  G+ F L+L   LA +R+ ++  ++ ++++Y+SFFRGTPLL
Sbjct: 10  LDSAPFLLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRIKPVNWIARIYVSFFRGTPLL 69

Query: 69  VQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSV 128
           VQLF++YYGLP+   L + L+  SAA+IG +L+ AAY  E +RAAI  ++R Q EA+ S+
Sbjct: 70  VQLFVIYYGLPE---LGIQLEPLSAALIGFSLNMAAYACEILRAAISSVERGQWEAAASI 126

Query: 129 GMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRF 188
           GMT  Q MRR ILPQA R ALP L N FI ++K T+LA T+ V E+  +AQ+  + +F  
Sbjct: 127 GMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEI 186

Query: 189 FEAFLAVALIYWVVVLVLTRLQSWAEQKLNK 219
           F  +LA ALIYW++   L+ LQ+  E ++N+
Sbjct: 187 FTMYLAAALIYWILATALSHLQNKLEARVNR 217