Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., amino acid ABC transporter permease from Rahnella sp. WP5

 Score =  131 bits (329), Expect = 1e-35
 Identities = 79/218 (36%), Positives = 119/218 (54%), Gaps = 3/218 (1%)

Query: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYIS 60
           M  D  +     P   +    TL +    L F +I  L LA ++  +      L+  Y+ 
Sbjct: 1   MSLDLVWQYLFSPAFFQGALMTLLLTVCSLFFGIIAGLVLALLQESRFRAGSVLAFFYLW 60

Query: 61  FFRGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRS 120
            FRGTP+L Q+  +Y  LP  F L     AF+ AV+ L+L+  AYMAE +R+ +  +   
Sbjct: 61  LFRGTPVLFQIIFVYNVLP-TFGLR--FSAFTCAVMALSLNEGAYMAEILRSGLQAVRSG 117

Query: 121 QMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 180
           Q  A +++GMT SQ MR+I+LPQA R+ LP + N  I M+KS++L   + V E++  A  
Sbjct: 118 QRTAGMALGMTQSQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLIANQ 177

Query: 181 EASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLN 218
            AS+SFR+FEA  A  + Y V+  V    Q+W E+ L+
Sbjct: 178 TASASFRYFEALCAAGIYYLVLTSVFMVGQAWLERSLD 215