Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  135 bits (341), Expect = 5e-37
 Identities = 77/220 (35%), Positives = 129/220 (58%), Gaps = 8/220 (3%)

Query: 3   FDFHYMLE-LLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISF 61
           FD  ++++ + P L   L  ++++     VF L+  + +  +RVF  P +  ++  Y + 
Sbjct: 2   FDVDFLVDRVFPSLNAGLWMSVKLIVPSAVFGLLFGVIIGIVRVFGKPWMQRIANAYTAL 61

Query: 62  FRGTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQ 121
           FRG PLLVQLF+LY+GLP +    + L+ ++A+V+G  L  AAY +E +R A++ I + Q
Sbjct: 62  FRGVPLLVQLFILYFGLPNIG---IYLEPYAASVLGFILCSAAYNSEYVRGALLSIRQGQ 118

Query: 122 MEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQME 181
           + A+ ++G +T Q +  I++PQA R ALP   N  + +IK +SLA+ +   E+  +A++ 
Sbjct: 119 LRAAQALGFSTMQTLVSIVVPQAVRRALPGCGNEIVYLIKYSSLAYVITCIELTGEAKVL 178

Query: 182 ASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAY 221
           AS +FRF E FL V   Y    L L  + SW   KL + +
Sbjct: 179 ASRTFRFTEVFLVVGAYY----LFLVTVASWLLHKLEERF 214