Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  139 bits (350), Expect = 4e-38
 Identities = 79/221 (35%), Positives = 134/221 (60%), Gaps = 6/221 (2%)

Query: 5   FHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVP-VLDPLSQLYISFFR 63
           F+ + + +P ++  +  TL++     + A+I+A+ + + R       LD +   Y+  FR
Sbjct: 3   FYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFR 62

Query: 64  GTPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQME 123
           GTPLL+QLF +YYGLP +    + + +  AAV+GL+L+  AY++E IRAAI  +   Q E
Sbjct: 63  GTPLLIQLFFIYYGLPSIG---ITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFE 119

Query: 124 ASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEAS 183
           A+ S+GM   ++M  I+LPQA R+ +P L+N F  ++K +SL   L + E+    Q+  +
Sbjct: 120 AAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYT 179

Query: 184 SSFRFFEAFLAVALIYWVVVLVLTRLQSW-AEQKLNKAYAR 223
            + R FE +L + LIY ++V +++ + SW  E+KLN A+ R
Sbjct: 180 RTSRPFEIYLTIGLIYLILVSIIS-IGSWKIEKKLNGAFER 219