Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., polar amino acid ABC transporter permease from Klebsiella michiganensis M5al

 Score =  129 bits (323), Expect = 7e-35
 Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 10/226 (4%)

Query: 3   FDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFF 62
           F   ++ +    +L  L  TL +    L+F+ +L   LA   + ++P +   +++++SF 
Sbjct: 2   FSLTFIRDNFTFILSALPVTLAITLLSLLFSTLLGAALAWAIIRQIPGVQVAAKVFLSFG 61

Query: 63  RGTPLLVQLFLLYYGLPQVFPLLVG----------LDAFSAAVIGLTLHFAAYMAESIRA 112
           R  P+LV L+  +Y  P V   L G          L   +AAV  L+L F+AY AE+ RA
Sbjct: 62  RSVPVLVMLYFFFYVWPWVAVGLFGGPQDTMFGYKLSPQAAAVTALSLIFSAYFAETFRA 121

Query: 113 AIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVA 172
               +D+ Q EA+ S+G++     RRIILPQA   ALP+  +  ID+IK TSL +T+ V 
Sbjct: 122 GWNAVDKGQREAAWSIGLSGFTQFRRIILPQAAVSALPNFTSVLIDLIKDTSLVYTITVV 181

Query: 173 EIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLN 218
           ++MAKA + A+  F F EA+  V +IY ++ L + R    AE  L+
Sbjct: 182 DLMAKANIAAARGFHFVEAYCVVLVIYILLCLAIARALRSAETFLS 227