Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  237 bits (605), Expect = 1e-67
 Identities = 118/244 (48%), Positives = 173/244 (70%), Gaps = 3/244 (1%)

Query: 1   MIKLQNIHKRFGTSEVLKGIDLEIQRGEIVVIIGSSGTGKSTLLRCVNFLEQADQGSIRI 60
           MI ++ + K F  ++VLKGIDL I+ GE+V IIG SG+GK+TLLRC+N LE  D G I++
Sbjct: 1   MIVVEKLTKAFKGNQVLKGIDLRIEAGEVVAIIGPSGSGKTTLLRCLNLLETPDSGRIKV 60

Query: 61  DELTVD---TQKHTKADVLALRRKTGFVFQNYALFAHLTARQNIAEALITVRGWKKAQAH 117
            ++ ++   +    +  +  LR++ GFVFQN+ LF H TA +N+ E  + V+   +  A 
Sbjct: 61  GDIEINGTRSMNQQQGLIRQLRQQVGFVFQNFNLFPHRTALENVIEGPVVVKKVAREAAE 120

Query: 118 QRAQQILDDIGLGDKGDSYPAALSGGQQQRVGIGRAMALQPELLLFDEPTSALDPEWVGE 177
              +++L  +GL  K D+YP  LSGGQQQRV I RA+A++P+++LFDEPTSALDPE VGE
Sbjct: 121 ALGRKLLAKVGLSGKEDAYPRRLSGGQQQRVAIARALAMEPQVILFDEPTSALDPELVGE 180

Query: 178 VLALMKKLATQHQTMLVVTHEMQFAKEVADRVIFMAEGKIVEQGSPQDIFDHPQDPRLRK 237
           VL  ++ LA + +TM++VTHEM FA+EVA+RVIF+ +G IVEQG  + +F +P++ R R+
Sbjct: 181 VLTTIRALAEEKRTMVIVTHEMSFAREVANRVIFIDKGVIVEQGEAKALFANPKEERTRQ 240

Query: 238 FLNQ 241
           FL +
Sbjct: 241 FLER 244