Pairwise Alignments

Query, 245 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  257 bits (656), Expect = 2e-73
 Identities = 133/244 (54%), Positives = 173/244 (70%), Gaps = 7/244 (2%)

Query: 1   MIKLQNIHKRFGTSEVLKGIDLEIQRGEIVVIIGSSGTGKSTLLRCVNFLEQADQGSIRI 60
           MIK+ N+HK FG ++VLKGID  I RGE+V +IG SG+GKST LRC+N LEQ  QG    
Sbjct: 1   MIKISNLHKYFGDNQVLKGIDESIARGEVVSVIGPSGSGKSTFLRCINLLEQPTQG---- 56

Query: 61  DELTVDTQKHTKADVLA--LRRKTGFVFQNYALFAHLTARQNIAEALITVRGWKKAQAHQ 118
            E+ +D Q  T  D     LR+K G VFQN+ LF H T +QNI  A + +    +A+A  
Sbjct: 57  -EIVIDGQSITAPDACIDKLRQKVGMVFQNFNLFPHKTVQQNITLAPVKLGLMTQAEADS 115

Query: 119 RAQQILDDIGLGDKGDSYPAALSGGQQQRVGIGRAMALQPELLLFDEPTSALDPEWVGEV 178
            A ++LD +GL DK  +YPA+LSGGQ+QRV I RA+A++PEL+LFDEPTSALDPE VG+V
Sbjct: 116 EAMRLLDQVGLSDKASAYPASLSGGQKQRVAIARALAMKPELMLFDEPTSALDPEMVGDV 175

Query: 179 LALMKKLATQHQTMLVVTHEMQFAKEVADRVIFMAEGKIVEQGSPQDIFDHPQDPRLRKF 238
           L +MK+LA    TM++VTHEM FAK+V+DRVIFM  G +VE   P  +F  PQ+PR + F
Sbjct: 176 LDVMKQLAQAGMTMVIVTHEMGFAKDVSDRVIFMDGGYVVESNVPALLFGQPQEPRTQAF 235

Query: 239 LNQV 242
           L++V
Sbjct: 236 LSKV 239