Pairwise Alignments

Query, 85 a.a., membrane protein insertion efficiency factor YidD from Vibrio cholerae E7946 ATCC 55056

Subject, 84 a.a., conserved hypothetical protein TIGR00278 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  117 bits (293), Expect = 3e-32
 Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 2/83 (2%)

Query: 1  MATPLSPFSWLAIGIVKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKR 60
          MA   SP  WLA  +++ YQ FISP++GPRCRF PTCS YAIEA++ HG  KGCW + KR
Sbjct: 1  MAQTQSPLQWLATTLIRGYQIFISPILGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKR 60

Query: 61 LLKCHPLNEGGFDPVPPVQKQDR 83
          +LKCHPL+ GG DPVPP  K DR
Sbjct: 61 ILKCHPLHPGGSDPVPP--KNDR 81